RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 TMEM8AQ9HCN3 771 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 SLCO3A1Q9UIG8 710 aa16.27■□□□□ 0.2
COPE-202ENST00000349893 TLN1Q9Y490 2541 aaKnown RBP16.26■□□□□ 0.19
COPE-202ENST00000349893 LY6G6EA0A0G2JKS1 128 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 A0A1B0GVM2 712 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 RNGTTO60942 597 aaKnown RBP16.26■□□□□ 0.19
COPE-202ENST00000349893 CSO75390 466 aaKnown RBP16.26■□□□□ 0.19
COPE-202ENST00000349893 GTF2H1P32780 548 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 AFMP43652 599 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 DAOAP59103 153 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 RPS24P62847 133 aaKnown RBP16.26■□□□□ 0.19
COPE-202ENST00000349893 DAB2P98082 770 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 BST2Q10589 180 aaKnown RBP16.26■□□□□ 0.19
COPE-202ENST00000349893 GOLGA7BQ2TAP0 167 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 SEMA4DQ92854 862 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 GRAMD1AQ96CP6 724 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 VCPIP1Q96JH7 1222 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 KLHL11Q9NVR0 708 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 STIM2Q9P246 746 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 TSPAN16Q9UKR8 245 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 U3KQA8 63 aa16.26■□□□□ 0.19
COPE-202ENST00000349893 PRAMEF26H0Y7S4 382 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 PDIA4P13667 645 aaKnown RBP16.25■□□□□ 0.19
COPE-202ENST00000349893 CDH18Q13634 790 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 STAT4Q14765 748 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 MS4A13Q5J8X5 152 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 KRT39Q6A163 491 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.25■□□□□ 0.19
COPE-202ENST00000349893 MMS22LQ6ZRQ5 1243 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 IRGQQ8WZA9 623 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 SPAG5Q96R06 1193 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 DDX50Q9BQ39 737 aaKnown RBP16.25■□□□□ 0.19
COPE-202ENST00000349893 USP29Q9HBJ7 922 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 EXOC1Q9NV70 894 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 UCKL1Q9NWZ5 548 aa16.25■□□□□ 0.19
COPE-202ENST00000349893 A0A1W2PNU3 283 aaPredicted RBP16.24■□□□□ 0.19
COPE-202ENST00000349893 TYW5A2RUC4 315 aaKnown RBP16.24■□□□□ 0.19
COPE-202ENST00000349893 CALUO43852 315 aaPredicted RBP16.24■□□□□ 0.19
COPE-202ENST00000349893 RTN2O75298 545 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 LUC7L3O95232 432 aaKnown RBP16.24■□□□□ 0.19
COPE-202ENST00000349893 IL1BP01584 269 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 SETSIPP0DME0 302 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 VASPP50552 380 aaPredicted RBP16.24■□□□□ 0.19
COPE-202ENST00000349893 METAP1P53582 386 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 KCNMA1Q12791 1236 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 NNTQ13423 1086 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 KMT5BQ4FZB7 885 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 SETMARQ53H47 684 aaPredicted RBP16.24■□□□□ 0.19
COPE-202ENST00000349893 AGBL4Q5VU57 503 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 GRAMD1CQ8IYS0 662 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 SIX6OS1Q8N1H7 587 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 CARNMT1Q8N4J0 409 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 FRS2Q8WU20 508 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 KLHDC7BQ96G42 594 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 FCRL2Q96LA5 508 aaPredicted RBP16.24■□□□□ 0.19
COPE-202ENST00000349893 SLC46A1Q96NT5 459 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 NLGN3Q9NZ94 848 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 TEX15Q9BXT5 2789 aa16.24■□□□□ 0.19
COPE-202ENST00000349893 GABBR2O75899 941 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 PIAS2O75928 621 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 MOCS3O95396 460 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 KRT13P13646 458 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 NR2F2P24468 414 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 MAT2AP31153 395 aaKnown RBP16.23■□□□□ 0.19
COPE-202ENST00000349893 TBX4P57082 545 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 ISXQ2M1V0 245 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 HS1BP3Q53T59 392 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 SGO2Q562F6 1265 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 RESP18Q5W5W9 173 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 LURAP1LQ8IV03 231 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 FAM186BQ8IYM0 893 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 APCDD1Q8J025 514 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 FBXL13Q8NEE6 735 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 CCDC97Q96F63 343 aaPredicted RBP16.23■□□□□ 0.19
COPE-202ENST00000349893 IFT43Q96FT9 208 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 SLC39A13Q96H72 371 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 INTS4Q96HW7 963 aaKnown RBP16.23■□□□□ 0.19
COPE-202ENST00000349893 RPL10LQ96L21 214 aaKnown RBP16.23■□□□□ 0.19
COPE-202ENST00000349893 APOLD1Q96LR9 279 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 NUCKS1Q9H1E3 243 aaKnown RBP16.23■□□□□ 0.19
COPE-202ENST00000349893 PREBQ9HCU5 417 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 HESX1Q9UBX0 185 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 IL17BQ9UHF5 180 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 SARDHQ9UL12 918 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 PCDHGA8Q9Y5G5 932 aa16.23■□□□□ 0.19
COPE-202ENST00000349893 CDRT15L2A8MXV6 281 aa16.22■□□□□ 0.19
COPE-202ENST00000349893 O00370 1275 aa16.22■□□□□ 0.19
COPE-202ENST00000349893 ACTN4O43707 911 aaKnown RBP16.22■□□□□ 0.19
COPE-202ENST00000349893 VAV1P15498 845 aa16.22■□□□□ 0.19
COPE-202ENST00000349893 STK19P49842 368 aaPredicted RBP16.22■□□□□ 0.19
COPE-202ENST00000349893 SLC12A1Q13621 1099 aa16.22■□□□□ 0.19
COPE-202ENST00000349893 DCAF6Q58WW2 860 aa16.22■□□□□ 0.19
COPE-202ENST00000349893 KIAA1614Q5VZ46 1190 aa16.22■□□□□ 0.19
COPE-202ENST00000349893 RNF219Q5W0B1 726 aaPredicted RBP16.22■□□□□ 0.19
COPE-202ENST00000349893 CCDC117Q8IWD4 279 aaPredicted RBP16.22■□□□□ 0.19
COPE-202ENST00000349893 PAGE5Q96GU1 130 aa16.22■□□□□ 0.19
COPE-202ENST00000349893 PRR11Q96HE9 360 aaPredicted RBP16.22■□□□□ 0.19
COPE-202ENST00000349893 ZNF396Q96N95 335 aaPredicted RBP16.22■□□□□ 0.19
COPE-202ENST00000349893 RAB20Q9NX57 234 aa16.22■□□□□ 0.19
COPE-202ENST00000349893 PPM1HQ9ULR3 514 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms