RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 KBTBD6Q86V97 674 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 FAM160A2Q8N612 972 aaPredicted RBP22.73■■□□□ 1.23
SNX3-202ENST00000349379 PPP1R9BQ96SB3 815 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 FEM1AQ9BSK4 669 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 TRIM7Q9C029 511 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 ZYG11BQ9C0D3 744 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 MKRN2Q9H000 416 aaKnown RBP22.73■■□□□ 1.23
SNX3-202ENST00000349379 MRPL47Q9HD33 250 aaKnown RBP22.73■■□□□ 1.23
SNX3-202ENST00000349379 MPP6Q9NZW5 540 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 OR12D3Q9UGF7 316 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 RAB23Q9ULC3 237 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 ERVW-1Q9UQF0 538 aa22.73■■□□□ 1.23
SNX3-202ENST00000349379 PTPRZ1P23471 2315 aaPredicted RBP22.73■■□□□ 1.23
SNX3-202ENST00000349379 FAM72CH0Y354 149 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 DCLK1O15075 740 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 EPHX1P07099 455 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 TPM1P09493 284 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 PSMA2P25787 234 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 CTSOP43234 321 aaPredicted RBP22.72■■□□□ 1.23
SNX3-202ENST00000349379 VASPP50552 380 aaPredicted RBP22.72■■□□□ 1.23
SNX3-202ENST00000349379 SULT2A1Q06520 285 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 PLK5Q496M5 336 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 FAM72AQ5TYM5 149 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 FAM72DQ6L9T8 149 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 SLFN11Q7Z7L1 901 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 METTL3Q86U44 580 aaKnown RBP22.72■■□□□ 1.23
SNX3-202ENST00000349379 C11orf74Q86VG3 221 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 FAM72BQ86X60 149 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 ARFGAP1Q8N6T3 406 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 RUBCNQ92622 972 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 MAGEB5Q9BZ81 275 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 DUSP15Q9H1R2 295 aaPredicted RBP22.72■■□□□ 1.23
SNX3-202ENST00000349379 RETREG1Q9H6L5 497 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 GVINP1Q7Z2Y8 2422 aa22.72■■□□□ 1.23
SNX3-202ENST00000349379 SYNCRIPO60506 623 aaKnown RBP22.71■■□□□ 1.23
SNX3-202ENST00000349379 SRGAP2O75044 1071 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 LRIG2O94898 1065 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 ADKP55263 362 aaKnown RBP22.71■■□□□ 1.23
SNX3-202ENST00000349379 ECT2LQ008S8 904 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 SLC18A3Q16572 532 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 LPAL2Q16609 132 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 PGBD3Q8N328 593 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 ZNF366Q8N895 744 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 ERLEC1Q96DZ1 483 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 LOXL4Q96JB6 756 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 THAP2Q9H0W7 228 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 SLC6A17Q9H1V8 727 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 FZD10Q9ULW2 581 aa22.71■■□□□ 1.23
SNX3-202ENST00000349379 ZBTB24O43167 697 aaPredicted RBP22.7■■□□□ 1.22
SNX3-202ENST00000349379 CYP1A2P05177 515 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 DESP17661 470 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 BCKDHBP21953 392 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 L1CAMP32004 1257 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 SEMA3BQ13214 749 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 BYSLQ13895 437 aaKnown RBP22.7■■□□□ 1.22
SNX3-202ENST00000349379 HNRNPA1L2Q32P51 320 aaKnown RBP22.7■■□□□ 1.22
SNX3-202ENST00000349379 CCDC122Q5T0U0 273 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 PMS2CLQ68D20 193 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 TFAP2DQ7Z6R9 452 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 NLRP14Q86W24 1093 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 TMPRSS6Q8IU80 811 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 CNGA4Q8IV77 575 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 FRMD1Q8N878 549 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 OR2T3Q8NH03 318 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 RLN3Q8WXF3 142 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 MRFAP1L1Q96HT8 127 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 PSMB7Q99436 277 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 CHP1Q99653 195 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 FBRSQ9HAH7 460 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 PRSS16Q9NQE7 514 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 MYO1AQ9UBC5 1043 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 SUN2Q9UH99 717 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 MBD1Q9UIS9 605 aaPredicted RBP22.7■■□□□ 1.22
SNX3-202ENST00000349379 INVSQ9Y283 1065 aa22.7■■□□□ 1.22
SNX3-202ENST00000349379 NUMA1Q14980 2115 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 RETP07949 1114 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 RHOCP08134 193 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 ZNF75DP51815 510 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 GALCP54803 685 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 ST8SIA6P61647 398 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 GFPT1Q06210 699 aaPredicted RBP22.69■■□□□ 1.22
SNX3-202ENST00000349379 EFHC2Q5JST6 749 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 C6orf118Q5T5N4 469 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 RNF219Q5W0B1 726 aaPredicted RBP22.69■■□□□ 1.22
SNX3-202ENST00000349379 SCYL2Q6P3W7 929 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 ZNF783Q6ZMS7 281 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.69■■□□□ 1.22
SNX3-202ENST00000349379 ARHGEF26Q96DR7 871 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 SPACA7Q96KW9 195 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 PRDM16Q9HAZ2 1276 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 ZNHIT6Q9NWK9 470 aaKnown RBP22.69■■□□□ 1.22
SNX3-202ENST00000349379 USP36Q9P275 1121 aaKnown RBP22.69■■□□□ 1.22
SNX3-202ENST00000349379 NCDNQ9UBB6 729 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 SLCO3A1Q9UIG8 710 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 GMEB2Q9UKD1 530 aa22.69■■□□□ 1.22
SNX3-202ENST00000349379 ILVBLA1L0T0 632 aa22.68■■□□□ 1.22
SNX3-202ENST00000349379 AKR1B15C9JRZ8 316 aaPredicted RBP22.68■■□□□ 1.22
SNX3-202ENST00000349379 ZNF217O75362 1048 aa22.68■■□□□ 1.22
SNX3-202ENST00000349379 EPN2O95208 641 aa22.68■■□□□ 1.22
SNX3-202ENST00000349379 RHOQP17081 205 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms