RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TMC8Q8IU68 726 aa19.14■□□□□ 0.65
PTN-201ENST00000348225 ZBED8Q8IZ13 594 aa19.14■□□□□ 0.65
PTN-201ENST00000348225 DEPDC1BQ8WUY9 529 aa19.14■□□□□ 0.65
PTN-201ENST00000348225 IGSF8Q969P0 613 aa19.14■□□□□ 0.65
PTN-201ENST00000348225 EIF2B3Q9NR50 452 aaKnown RBP19.14■□□□□ 0.65
PTN-201ENST00000348225 NUP205Q92621 2012 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 ARHGEF15O94989 841 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 FGF19O95750 216 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 LATS1O95835 1130 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 ABHD2P08910 425 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 IRF1P10914 325 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 PFKLP17858 780 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 ALFQ53S48 1182 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 DENND1CQ8IV53 801 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 LGI2Q8N0V4 545 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 C9orf72Q96LT7 481 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 CEP41Q9BYV8 373 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 NDFIP2Q9NV92 336 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 SHROOM3Q8TF72 1996 aa19.13■□□□□ 0.65
PTN-201ENST00000348225 GOLGA6L7A0A1B0GV03 622 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 ARHGAP42A6NI28 874 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 CNTN5O94779 1100 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 HDCP19113 662 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 ERVK-21P61565 698 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 GAD2Q05329 585 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 CBLBQ13191 982 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 KRT71Q3SY84 523 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 BBS9Q3SYG4 887 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 TEX44Q53QW1 395 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 FAM133BQ5BKY9 247 aaKnown RBP19.12■□□□□ 0.65
PTN-201ENST00000348225 FNBP1LQ5T0N5 605 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 FAM109BQ6ICB4 259 aaPredicted RBP19.12■□□□□ 0.65
PTN-201ENST00000348225 SERPINB12Q96P63 405 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 LRRC3Q9BY71 257 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 MAN1C1Q9NR34 630 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 GKN1Q9NS71 199 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 DPP7Q9UHL4 492 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 DENND4CQ5VZ89 1909 aa19.12■□□□□ 0.65
PTN-201ENST00000348225 CCL16O15467 120 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 MAFKO60675 156 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 SHBGP04278 402 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 PSMB4P28070 264 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 HOXA9P31269 272 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 IRS1P35568 1242 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 PAPOLAP51003 745 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 IRAK1P51617 712 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 IFI35P80217 286 aaPredicted RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 SMAD3P84022 425 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 GPM6BQ13491 265 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 ANO4Q32M45 955 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 PARP15Q460N3 678 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 DNAJC21Q5F1R6 531 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 SYCP2LQ5T4T6 812 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 TXNDC8Q6A555 127 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 ELMSAN1Q6PJG2 1045 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 GAREM2Q75VX8 874 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 SPRED2Q7Z698 418 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 HS6ST3Q8IZP7 471 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 ARL14EPQ8N8R7 260 aaPredicted RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 PYROXD1Q8WU10 500 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 ABHD8Q96I13 439 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 CORO1BQ9BR76 489 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 CCDC77Q9BR77 488 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 TMEM109Q9BVC6 243 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 GBA3Q9H227 469 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 ATXN3LQ9H3M9 355 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 TMBIM4Q9HC24 238 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 XAB2Q9HCS7 855 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 RSPH14Q9UHP6 348 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 NYNRINQ9P2P1 1898 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 A0A087WUV0 522 aaPredicted RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 TRAV19A0A0A6YYK7 116 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 H3BNC9 293 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 MATN3O15232 486 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 RAMP2O60895 175 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 CLASP2O75122 1294 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 MYL4P12829 197 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 TSHRP16473 764 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 OR1E1P30953 314 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 SLC6A4P31645 630 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 YBEYP58557 167 aaPredicted RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 CYP4F8P98187 520 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 ZBTB17Q13105 803 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 CAMK1Q14012 370 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 FAM182AQ5T1J6 154 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 ADGRF1Q5T601 910 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 ATP11CQ8NB49 1132 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 UHMK1Q8TAS1 419 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 SLC22A17Q8WUG5 538 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 FATE1Q969F0 183 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 ZFRQ96KR1 1074 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 TEKT5Q96M29 485 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 ROPN1BQ9BZX4 212 aaPredicted RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 NOL6Q9H6R4 1146 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 ROPN1Q9HAT0 212 aaPredicted RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 SMPD4Q9NXE4 827 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 IPO11Q9UI26 975 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 AGO1Q9UL18 857 aaKnown RBP19.11■□□□□ 0.65
PTN-201ENST00000348225 CPQQ9Y646 472 aa19.11■□□□□ 0.65
PTN-201ENST00000348225 HMGB1P1B2RPK0 211 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms