RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 RAB3IPQ96QF0 476 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 WDR55Q9H6Y2 383 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 XAB2Q9HCS7 855 aaKnown RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SNX15Q9NRS6 342 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SLC2A6Q9UGQ3 507 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 NRCAMQ92823 1304 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 PATJQ8NI35 1801 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 COL4A4P53420 1690 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 COL1A2P08123 1366 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 TMEM233B4DJY2 109 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 XPO1O14980 1071 aaKnown RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ATP9BO43861 1147 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SIN3BO75182 1162 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ARNTP27540 789 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 PGM1P36871 562 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 AVPR1AP37288 418 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 DPP6P42658 865 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 CSRP3P50461 194 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 STX3Q13277 289 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 LRRC36Q1X8D7 754 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 WASHC2DQ5SRD0 308 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 TMEM198Q66K66 360 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 NOTUMQ6P988 496 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 TIFABQ6ZNK6 161 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 MARK2Q7KZI7 788 aaKnown RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ARMCX6Q7L4S7 300 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 PID1Q7Z2X4 250 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ZNF410Q86VK4 478 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SNX31Q8N9S9 440 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 TRPV1Q8NER1 839 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 APPL2Q8NEU8 664 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SH3TC2Q8TF17 1288 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 MARK4Q96L34 752 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 SLC2A13Q96QE2 648 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 GAD1Q99259 594 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ATXN3LQ9H3M9 355 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 AGO3Q9H9G7 860 aaKnown RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 PPCSQ9HAB8 311 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 PLEKHA5Q9HAU0 1116 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 PCDH10Q9P2E7 1040 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 ADAMTS6Q9UKP5 1117 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 TLL2Q9Y6L7 1015 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 PTPRDP23468 1912 aa6.19□□□□□ -1.42
CLCN3-201ENST00000347613 FNDC1Q4ZHG4 1894 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-201ENST00000347613 GOLGA8QA0A0J9YX86 632 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 GOLGA8OA6NCC3 632 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CASTOR2A6NHX0 329 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 GOLGA8NF8WBI6 632 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 TK2O00142 265 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 BUD23O43709 281 aaKnown RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 PEX14O75381 377 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 ADRA1BP35368 520 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 GLUD2P49448 558 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CXCR3P49682 368 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 APLP1P51693 650 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CCNIQ14094 377 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 MFSD10Q14728 455 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 TSTD2Q5T7W7 516 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 LPCAT4Q643R3 524 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 UNC93AQ86WB7 457 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CEP97Q8IW35 865 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 DENND6AQ8IWF6 608 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 BEST2Q8NFU1 509 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 HNRNPABQ99729 332 aaKnown RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 C1QTNF1Q9BXJ1 281 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 SUDS3Q9H7L9 328 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 MKS1Q9NXB0 559 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 DDX43Q9NXZ2 648 aaKnown RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 KCNK4Q9NYG8 393 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 COPG2Q9UBF2 871 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 C9IYK1 514 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 HAS3O00219 553 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 PHGDHO43175 533 aaKnown RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 ATP5HO75947 161 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CHRNA1P02708 482 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 NCAM1P13591 858 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 KCNE1P15382 129 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 NPR3P17342 541 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 NFKB1P19838 968 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 ATP6V1C1P21283 382 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 PAX3P23760 479 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CHRNA4P43681 627 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 BRCC3P46736 316 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 GLRBP48167 497 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 GJA9P57773 515 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 PAFAH1B3Q15102 231 aaKnown RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 DCAF4L1Q3SXM0 396 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 SPDYAQ5MJ70 313 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 STRADAQ7RTN6 431 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 HPS6Q86YV9 775 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CDKL3Q8IVW4 592 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 WDR75Q8IWA0 830 aaKnown RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 SPDL1Q96EA4 605 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 SLC45A3Q96JT2 553 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 GCOM2Q9BZD3 368 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 TRIM6Q9C030 488 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-201ENST00000347613 DNAI2Q9GZS0 605 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 OSER1Q9NX31 292 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 MORF4L1Q9UBU8 362 aa6.18□□□□□ -1.42
CLCN3-201ENST00000347613 CCDC189A1A4V9 331 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms