RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 IL2P60568 153 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 PAPD7Q5XG87 772 aaKnown RBP23.52■■□□□ 1.36
NPAS3-201ENST00000346562 RGL4Q8IZJ4 473 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 TMEM79Q9BSE2 394 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 GALNT8Q9NY28 637 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 CAPN6Q9Y6Q1 641 aa23.52■■□□□ 1.36
NPAS3-201ENST00000346562 ENO4A6NNW6 628 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 MYL12BO14950 172 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 CCR4P51679 360 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 TCEA2Q15560 299 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 ALG11Q2TAA5 492 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 GJC2Q5T442 439 aaPredicted RBP23.51■■□□□ 1.35
NPAS3-201ENST00000346562 ZNF618Q5T7W0 954 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 BNIPLQ7Z465 357 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 BRSK2Q8IWQ3 736 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 POMKQ9H5K3 350 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 SOHLH2Q9NX45 425 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 MEI4A8MW99 385 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 PIK3R1P27986 724 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 TRIM25Q14258 630 aaKnown RBP23.51■■□□□ 1.35
NPAS3-201ENST00000346562 REXO1L1PQ8IX06 675 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 SLC5A5Q92911 643 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 MCCC1Q96RQ3 725 aaPredicted RBP23.51■■□□□ 1.35
NPAS3-201ENST00000346562 SEPHS2Q99611 448 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 TAF6LQ9Y6J9 622 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 ADCY6O43306 1168 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 ELK3P41970 407 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 ITGA1P56199 1179 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 PPATQ06203 517 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 INSCQ1MX18 579 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 CYB5D1Q6P9G0 228 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 TKTL2Q9H0I9 626 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 H3BN98 237 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 CD3EAPO15446 510 aaKnown RBP23.51■■□□□ 1.35
NPAS3-201ENST00000346562 ATP12AP54707 1039 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 RBM43Q6ZSC3 357 aaKnown RBP23.51■■□□□ 1.35
NPAS3-201ENST00000346562 TRAPPC5Q8IUR0 188 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 DEFB107AQ8IZN7 70 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 SAE1Q9UBE0 346 aaPredicted RBP23.51■■□□□ 1.35
NPAS3-201ENST00000346562 CCDC130P13994 396 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 GPC2Q8N158 579 aa23.51■■□□□ 1.35
NPAS3-201ENST00000346562 TNPO3Q9Y5L0 923 aaKnown RBP23.51■■□□□ 1.35
NPAS3-201ENST00000346562 H7C0S8 307 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 CXCR2P25025 360 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 COPZ1P61923 177 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 CACTIN-AS1Q8N1I8 211 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 CEP152O94986 1710 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 ANXA6P08133 673 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 PTENP60484 403 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 FAM126BQ8IXS8 530 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 KLHL31Q9H511 634 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 DCLRE1BQ9H816 532 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 MAPRE3Q9UPY8 281 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 ACSL4O60488 711 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 FGRP09769 529 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 ERVK-9P63128 1117 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 BIKQ13323 160 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 FAM20CQ8IXL6 584 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 ANKRD7Q92527 254 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 CEP44Q9C0F1 390 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 GNPTGQ9UJJ9 305 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 NR2E3Q9Y5X4 410 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 TBC1D3BA6NDS4 549 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 CDK7P50613 346 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 TRMT5Q32P41 509 aaKnown RBP23.5■■□□□ 1.35
NPAS3-201ENST00000346562 HGH1Q9BTY7 390 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 THAP1Q9NVV9 213 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 SIK3Q9Y2K2 1263 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 EPN2O95208 641 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 VAPBO95292 243 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 USP17L7P0C7H9 530 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 COX7A2P14406 83 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 GPSM1Q86YR5 675 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 NKX2-3Q8TAU0 364 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 MYCBPAPQ8TBZ2 947 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 CDHR5Q9HBB8 845 aa23.5■■□□□ 1.35
NPAS3-201ENST00000346562 ARHGEF19Q8IW93 802 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 TMEM199Q8N511 208 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 PDGFDQ9GZP0 370 aaPredicted RBP23.49■■□□□ 1.35
NPAS3-201ENST00000346562 NEK6Q9HC98 313 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 ARL15Q9NXU5 204 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 GAKO14976 1311 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 C15orf38-AP3S2A0A0A6YYH1 394 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 MSCO60682 206 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 AMD1P17707 334 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 IGFBP4P22692 258 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 MSLNQ13421 630 aaPredicted RBP23.49■■□□□ 1.35
NPAS3-201ENST00000346562 PDZK1Q5T2W1 519 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 ARPINQ7Z6K5 226 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 KRT73Q86Y46 540 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 PIK3R5Q8WYR1 880 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 ZNF558Q96NG5 402 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 A0A096LPK6 155 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 HIST1H2ABP04908 130 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 S100A3P33764 101 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 ATP5C1P36542 298 aaKnown RBP23.49■■□□□ 1.35
NPAS3-201ENST00000346562 SERPINH1P50454 418 aaKnown RBP23.49■■□□□ 1.35
NPAS3-201ENST00000346562 USP50Q70EL3 339 aaPredicted RBP23.49■■□□□ 1.35
NPAS3-201ENST00000346562 HIST3H2AQ7L7L0 130 aa23.49■■□□□ 1.35
NPAS3-201ENST00000346562 HIST1H2ACQ93077 130 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms