RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CKAP2Q8WWK9 683 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SHC3Q92529 594 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 PLEKHA8Q96JA3 519 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 C20orf96Q9NUD7 363 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SLC45A1Q9Y2W3 748 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 PARP4Q9UKK3 1724 aaKnown RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 ABHD14A-ACY1A0A1B0GW23 586 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 GUCY1B2O75343 617 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 PTPN2P17706 415 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SERPINB3P29508 390 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 RPIAP49247 311 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SCNN1BP51168 640 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 GTF2BQ00403 316 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 TMED1Q13445 227 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 TRIP10Q15642 601 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 LEMD2Q8NC56 503 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 ZNF75CPQ92670 426 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 WRAP73Q9P2S5 460 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 CDH9Q9ULB4 789 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 QSOX1O00391 747 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 KIF1CO43896 1103 aaKnown RBP11.1□□□□□ -0.63
CLCN6-202ENST00000346436 POU4F1Q01851 419 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 CCDC85BQ15834 202 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-202ENST00000346436 MARC1Q5VT66 337 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 LCA5Q86VQ0 697 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 COLGALT2Q8IYK4 626 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 ICA1LQ8NDH6 482 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 FAM172AQ8WUF8 416 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 RXFP2Q8WXD0 754 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 BBS2Q9BXC9 721 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 OSBPL7Q9BZF2 842 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 UNKQ9C0B0 810 aaKnown RBP11.1□□□□□ -0.63
CLCN6-202ENST00000346436 C12orf65Q9H3J6 166 aaKnown RBP11.1□□□□□ -0.63
CLCN6-202ENST00000346436 ZFP14Q9HCL3 533 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 LSM8O95777 96 aaKnown RBP11.1□□□□□ -0.63
CLCN6-202ENST00000346436 TNFSF9P41273 254 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 SERPINB4P48594 390 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 CRHR2Q13324 411 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 GRM3Q14832 879 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 GPR158Q5T848 1215 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 ISLR2Q6UXK2 745 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 ACDQ96AP0 544 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 PHF21AQ96BD5 680 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 SGF29Q96ES7 293 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 BATF3Q9NR55 127 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 UBA2Q9UBT2 640 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-202ENST00000346436 C15orf41Q9Y2V0 281 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 RASSF9O75901 435 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 MMP13P45452 471 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 FAAP100Q0VG06 881 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 RASA2Q15283 850 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 CYTH1Q15438 398 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 COLEC12Q5KU26 742 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 RARS2Q5T160 578 aaKnown RBP11.1□□□□□ -0.63
CLCN6-202ENST00000346436 ARMC12Q5T9G4 340 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 GPR135Q8IZ08 494 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 GALNT4Q8N4A0 578 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 OR5B17Q8NGF7 314 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 PANX3Q96QZ0 392 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 APOL2Q9BQE5 337 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 PCDHA2Q9Y5H9 948 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 SCN11AQ9UI33 1791 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 A0A1W2PPM1 405 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 CYP2C18P33260 490 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 VHLP40337 213 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
CLCN6-202ENST00000346436 PPP1R13LQ8WUF5 828 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 JADE3Q92613 823 aa11.1□□□□□ -0.63
CLCN6-202ENST00000346436 XAB2Q9HCS7 855 aaKnown RBP11.1□□□□□ -0.63
CLCN6-202ENST00000346436 SNED1Q8TER0 1413 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 AOC2O75106 756 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 GABRR2P28476 465 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 MAP3K10Q02779 954 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 DCAF12L1Q5VU92 463 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 CCNJLQ8IV13 435 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 TEX9Q8N6V9 391 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 TASP1Q9H6P5 420 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 LRRC19Q9H756 370 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 TMEM161AQ9NX61 479 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 SEPT3Q9UH03 358 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 SLC27A6Q9Y2P4 619 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 CENPAP49450 140 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 TOMM20Q15388 145 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 ZC3H14Q6PJT7 736 aaKnown RBP11.09□□□□□ -0.63
CLCN6-202ENST00000346436 ANO5Q75V66 913 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 ZCCHC9Q8N567 271 aaKnown RBP11.09□□□□□ -0.63
CLCN6-202ENST00000346436 TSTD1Q8NFU3 115 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 ZNF669Q96BR6 464 aaPredicted RBP11.09□□□□□ -0.63
CLCN6-202ENST00000346436 CENPTQ96BT3 561 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 TCF25Q9BQ70 676 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 PCDH9Q9HC56 1237 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 H2AFY2Q9P0M6 372 aaPredicted RBP11.09□□□□□ -0.63
CLCN6-202ENST00000346436 URADA6NGE7 173 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 ANXA5P08758 320 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 UQCRBP14927 111 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 RFC1P35251 1148 aaPredicted RBP11.09□□□□□ -0.63
CLCN6-202ENST00000346436 TMEM259Q4ZIN3 620 aa11.09□□□□□ -0.63
CLCN6-202ENST00000346436 ZNF544Q6NX49 715 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms