RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TMCC2O75069 709 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 MYL9P24844 172 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 FBXW8Q8N3Y1 598 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 ST3GAL5Q9UNP4 418 aa19.71■□□□□ 0.75
HDAC4-201ENST00000345617 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.71■□□□□ 0.754e-7■■■■■ 41
HDAC4-201ENST00000345617 KPNA6O60684 536 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 DHFRP00374 187 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 HOXC6P09630 235 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 LMBRD2Q68DH5 695 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-201ENST00000345617 ENGASEQ8NFI3 743 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 PYDC1Q8WXC3 89 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 SMAD5Q99717 465 aaKnown RBP19.7■□□□□ 0.74
HDAC4-201ENST00000345617 KCNH4Q9UQ05 1017 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 TBC1D30Q9Y2I9 924 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 CHD2O14647 1828 aaKnown RBP19.7■□□□□ 0.74
HDAC4-201ENST00000345617 ECE2O60344 883 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 HOXC8P31273 242 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 IL22Q9GZX6 179 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 ADAM28Q9UKQ2 775 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 QRFPRQ96P65 431 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 VAT1Q99536 393 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 CHKBQ9Y259 395 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 STAU1O95793 577 aaKnown RBP19.7■□□□□ 0.74
HDAC4-201ENST00000345617 PLEKP08567 350 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-201ENST00000345617 EPB42P16452 691 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 DSG3P32926 999 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 ALG11Q2TAA5 492 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 NECAB2Q7Z6G3 386 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 KLHL32Q96NJ5 620 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 CDRT15Q96T59 188 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 CAPN6Q9Y6Q1 641 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 ANKRD26Q9UPS8 1709 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 H7C4K7 107 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 IFRD1O00458 451 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-201ENST00000345617 PROSCO94903 275 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 RPRD1AQ96P16 312 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-201ENST00000345617 KIAA1683Q9H0B3 1180 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 MRASO14807 208 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 CHADO15335 359 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 RNASEH1O60930 286 aaKnown RBP19.7■□□□□ 0.74
HDAC4-201ENST00000345617 PROCP04070 461 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 ATG14Q6ZNE5 492 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 MREGQ8N565 214 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 H3BQF6 201 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 RAB26Q9ULW5 256 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 PRPF19Q9UMS4 504 aaKnown RBP19.7■□□□□ 0.74
HDAC4-201ENST00000345617 COQ6Q9Y2Z9 468 aa19.7■□□□□ 0.74
HDAC4-201ENST00000345617 DGCR6Q14129 220 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 COMMD2Q86X83 199 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 CLYBLQ8N0X4 340 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 RDH11Q8TC12 318 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 MTG1Q9BT17 334 aaPredicted RBP19.69■□□□□ 0.74
HDAC4-201ENST00000345617 ZNF221Q9UK13 617 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 DCXO43602 365 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 TSHRP16473 764 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 NPY2RP49146 381 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 GLB1LQ6UWU2 654 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 UCMAQ8WVF2 138 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 SSR3Q9UNL2 185 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 MGAT4AQ9UM21 535 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 LOXHD1Q8IVV2 1947 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 LOC110117498-PIK3R3F6TDL0 507 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 CHRNGP07510 517 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 ARPC4P59998 168 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 SAMD3Q8N6K7 520 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 ABCB10Q9NRK6 738 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 ABCC3O15438 1527 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 CARNS1A5YM72 827 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 C19orf81C9J6K1 198 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 SEMA3DO95025 777 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 MRPS22P82650 360 aaKnown RBP19.69■□□□□ 0.74
HDAC4-201ENST00000345617 POC5Q8NA72 575 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 SYTL5Q8TDW5 730 aaPredicted RBP19.69■□□□□ 0.74
HDAC4-201ENST00000345617 MCUBQ9NWR8 336 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 SRP54P61011 504 aaKnown RBP19.69■□□□□ 0.74
HDAC4-201ENST00000345617 PEX5LQ8IYB4 626 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 AP4E1Q9UPM8 1137 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 IDO1P14902 403 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 ADSLP30566 484 aaPredicted RBP19.69■□□□□ 0.74
HDAC4-201ENST00000345617 FGD3Q5JSP0 725 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 C16orf86Q6ZW13 317 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 FAM118BQ9BPY3 351 aa19.69■□□□□ 0.74
HDAC4-201ENST00000345617 NAMPTP43490 491 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 NRF1Q16656 503 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 STRIP1Q5VSL9 837 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 TRPC4Q9UBN4 977 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 POLR1DQ9Y2S0 133 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 MATN2O00339 956 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 AKR1D1P51857 326 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 PAGE2BQ5JRK9 111 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 AAGABQ6PD74 315 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 CBWD2Q8IUF1 395 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 HERC6Q8IVU3 1022 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 CCDC3Q9BQI4 270 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 MID1IP1Q9NPA3 183 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 LSM1O15116 133 aaKnown RBP19.68■□□□□ 0.74
HDAC4-201ENST00000345617 SGTAO43765 313 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 NT5DC1Q5TFE4 455 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 C1QTNF1Q9BXJ1 281 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 ZNF232Q9UNY5 417 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms