RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 DNAJA2O60884 412 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MITFO75030 526 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 NOS2P35228 1153 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 GMPRP36959 345 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 AP3B2Q13367 1082 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MROQ9BYG7 248 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ADAMTS10Q9H324 1103 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 EMILIN3Q9NT22 766 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 WWOXQ9NZC7 414 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PLEKHG3A1L390 1219 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RHPN2P1A8MT19 583 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CCNA1P78396 465 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PTK2Q05397 1052 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PTRHD1Q6GMV3 140 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CDC73Q6P1J9 531 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RNFT2Q96EX2 444 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 C17orf80Q9BSJ5 609 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KDM3AQ9Y4C1 1321 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 FAM153BP0C7A2 387 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PRKCAP17252 672 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 DPYDQ12882 1025 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ABLIM2Q6H8Q1 611 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TIGD7Q6NT04 549 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TICAM1Q8IUC6 712 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KCNH5Q8NCM2 988 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TESCQ96BS2 214 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RIOK2Q9BVS4 552 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 NIFKQ9BYG3 293 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 OR51V1Q9H2C8 321 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PPP2R3BQ9Y5P8 575 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PEX16Q9Y5Y5 336 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 C6orf222P0C671 652 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TSPAN7P41732 249 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 HOXA1P49639 335 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 VEGFCP49767 419 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ALCAMQ13740 583 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MPP2Q14168 576 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PPP1R26Q5T8A7 1209 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PTF1AQ7RTS3 328 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 NT5DC3Q86UY8 548 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 LINC00301Q8NCQ3 95 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KRT35Q92764 455 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TXNDC15Q96J42 360 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 NOL11Q9H8H0 719 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PIH1D1Q9NWS0 290 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MGAT4BQ9UQ53 548 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CIDEAO60543 219 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ZBTB6Q15916 424 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 AKIRIN2Q53H80 203 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 DCAF17Q5H9S7 520 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 FAM173BQ6P4H8 233 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PTAR1Q7Z6K3 402 aaPredicted RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CERS2Q96G23 380 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 Q96MT0 163 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF570Q96NI8 536 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 VTI1BQ9UEU0 232 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 AURKCQ9UQB9 309 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 BMP10O95393 424 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 JUNP05412 331 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PTPN6P29350 595 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ETV4P43268 484 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 BHLHB9Q6PI77 547 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TIGD4Q8IY51 512 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 GRAMD1CQ8IYS0 662 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 INTS12Q96CB8 462 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 HTATIP2Q9BUP3 242 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 EIF2AK4Q9P2K8 1649 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 OR5K4A6NMS3 321 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 E2F3O00716 465 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 HSPA12AO43301 675 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RASGRP1O95267 797 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 AMPD1P23109 780 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CYP2C18P33260 490 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CACHD1Q5VU97 1274 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ASPGQ86U10 573 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TAAR8Q969N4 342 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 EXOC2Q96KP1 924 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CNOT6LQ96LI5 555 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ABCG4Q9H172 646 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ARHGAP28Q9P2N2 729 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SEC14L4Q9UDX3 406 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SLC24A2Q9UI40 661 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 CTNND2Q9UQB3 1225 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 OR5K3A6NET4 321 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ATP12AP54707 1039 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SCN1BQ07699 218 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 PMPCAQ10713 525 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 KRT26Q7Z3Y9 468 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RRNAD1Q96FB5 475 aaKnown RBP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 ZYG11BQ9C0D3 744 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 TRAPPC8Q9Y2L5 1435 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 USP27XA6NNY8 438 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 DDX3XO00571 662 aaKnown RBP eCLIP3.83□□□□□ -1.8
SYNE2-202ENST00000344113 SLC27A2O14975 620 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 RIMBP2O15034 1052 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 FUT4P22083 530 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 GABREP78334 506 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 NDUFAF6Q330K2 333 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 MPP7Q5T2T1 576 aa3.83□□□□□ -1.8
SYNE2-202ENST00000344113 OR7E24Q6IFN5 339 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms