RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 FBXL22Q6P050 247 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 DNAJC24Q6P3W2 148 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 OR8K1Q8NGG5 319 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 FIBINQ8TAL6 211 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 WFDC5Q8TCV5 224 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.59■□□□□ 0.57
USF2-202ENST00000343550 RAB6CQ9H0N0 254 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 ARHGAP20Q9P2F6 1191 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 HS3ST4Q9Y661 456 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 MAP1BP46821 2468 aaKnown RBP18.59■□□□□ 0.57
USF2-202ENST00000343550 TNRC6BQ9UPQ9 1833 aaKnown RBP18.59■□□□□ 0.57
USF2-202ENST00000343550 TYW5A2RUC4 315 aaKnown RBP18.59■□□□□ 0.57
USF2-202ENST00000343550 F5H5T6 163 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 NPC1O15118 1278 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 TIMM44O43615 452 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 GFPT1Q06210 699 aaPredicted RBP18.59■□□□□ 0.57
USF2-202ENST00000343550 MAMLD1Q13495 774 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 ARID5BQ14865 1188 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 PLEKHA7Q6IQ23 1121 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 ANKS1BQ7Z6G8 1248 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 RABEPKQ7Z6M1 372 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 SLC41A1Q8IVJ1 513 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 DEFB124Q8NES8 71 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 LMLNQ96KR4 655 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 C1orf74Q96LT6 269 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 DNAJC7Q99615 494 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 SIK2Q9H0K1 926 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 FSCN3Q9NQT6 498 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 TMPRSS4Q9NRS4 437 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 ABCB8Q9NUT2 735 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 PARVAQ9NVD7 372 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 ELOVL2Q9NXB9 296 aa18.59■□□□□ 0.57
USF2-202ENST00000343550 THAP10Q9P2Z0 257 aaPredicted RBP18.59■□□□□ 0.57
USF2-202ENST00000343550 NDUFS2O75306 463 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 GPD1P21695 349 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 ATXN3P54252 364 aaPredicted RBP18.58■□□□□ 0.56
USF2-202ENST00000343550 FOXC1Q12948 553 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 STARD3Q14849 445 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 CDO1Q16878 200 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 FUT11Q495W5 492 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 KIAA1324Q6UXG2 1013 aaKnown RBP18.58■□□□□ 0.56
USF2-202ENST00000343550 STRADAQ7RTN6 431 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 C14orf80Q86SX3 495 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 VPS36Q86VN1 386 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 FAM131BQ86XD5 332 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 MFN1Q8IWA4 741 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 CARNMT1Q8N4J0 409 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.58■□□□□ 0.56
USF2-202ENST00000343550 UCMAQ8WVF2 138 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 IGSF8Q969P0 613 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 ZNF419Q96HQ0 510 aaPredicted RBP18.58■□□□□ 0.56
USF2-202ENST00000343550 HSPA12BQ96MM6 686 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 MCEEQ96PE7 176 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 HAPLN3Q96S86 360 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 GTPBP2Q9BX10 602 aaKnown RBP18.58■□□□□ 0.56
USF2-202ENST00000343550 CAPN10Q9HC96 672 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 CD93Q9NPY3 652 aa18.58■□□□□ 0.56
USF2-202ENST00000343550 A0A087X0T9 212 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 FAM228BP0C875 321 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 CD70P32970 193 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 IL12RB1P42701 662 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 ZNF143P52747 638 aaPredicted RBP18.57■□□□□ 0.56
USF2-202ENST00000343550 TBX2Q13207 712 aaPredicted RBP18.57■□□□□ 0.56
USF2-202ENST00000343550 ENPP2Q13822 863 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 EIF4HQ15056 248 aaKnown RBP18.57■□□□□ 0.56
USF2-202ENST00000343550 C5orf22Q49AR2 442 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 FSCBQ5H9T9 825 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 DCUN1D2Q6PH85 259 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 ADIPOR2Q86V24 386 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 ZNF557Q8N988 423 aaPredicted RBP18.57■□□□□ 0.56
USF2-202ENST00000343550 SLC32A1Q9H598 525 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 PRDM16Q9HAZ2 1276 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 GGA2Q9UJY4 613 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 VANGL2Q9ULK5 521 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 WASF3Q9UPY6 502 aa18.57■□□□□ 0.56
USF2-202ENST00000343550 ANKRD62A6NC57 917 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 H0Y626 953 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 LUC7L3O95232 432 aaKnown RBP18.56■□□□□ 0.56
USF2-202ENST00000343550 PABPC1P11940 636 aaKnown RBP18.56■□□□□ 0.56
USF2-202ENST00000343550 ADRA1BP35368 520 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 GGCXP38435 758 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 ADKP55263 362 aaKnown RBP18.56■□□□□ 0.56
USF2-202ENST00000343550 HDAC4P56524 1084 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 SEMA3BQ13214 749 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 E2F5Q15329 346 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 RABGAP1LQ5R372 815 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 ACBD5Q5T8D3 534 aaPredicted RBP18.56■□□□□ 0.56
USF2-202ENST00000343550 CHST9Q7L1S5 443 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 METTL3Q86U44 580 aaKnown RBP18.56■□□□□ 0.56
USF2-202ENST00000343550 ZNF683Q8IZ20 524 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 HDDC3Q8N4P3 179 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 FAM172AQ8WUF8 416 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 RPRD1AQ96P16 312 aaPredicted RBP18.56■□□□□ 0.56
USF2-202ENST00000343550 MKRN2Q9H000 416 aaKnown RBP18.56■□□□□ 0.56
USF2-202ENST00000343550 CNOT8Q9UFF9 292 aaKnown RBP18.56■□□□□ 0.56
USF2-202ENST00000343550 SNX10Q9Y5X0 201 aa18.56■□□□□ 0.56
USF2-202ENST00000343550 UPK3BL1B0FP48 263 aa18.55■□□□□ 0.56
USF2-202ENST00000343550 UPK3BL2E5RIL1 263 aa18.55■□□□□ 0.56
USF2-202ENST00000343550 ARHGAP33O14559 1287 aa18.55■□□□□ 0.56
USF2-202ENST00000343550 ATMINO43313 823 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms