RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 GLI1P08151 1106 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 TBC1D3HP0C7X1 549 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 CDK4P11802 303 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 CCR1P32246 355 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 USP8P40818 1118 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 ELAVL3Q14576 367 aaKnown RBP13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 TBC1D3GQ6DHY5 549 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 TBC1D3CQ6IPX1 549 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 MMS22LQ6ZRQ5 1243 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 TBC1D3Q8IZP1 549 aaPredicted RBP13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 OR14C36Q8NHC7 312 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 RPL10LQ96L21 214 aaKnown RBP13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 ELF4Q99607 663 aaPredicted RBP13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 FAM204AQ9H8W3 233 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 GDF3Q9NR23 364 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 SLCO3A1Q9UIG8 710 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 BTBD3Q9Y2F9 522 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 SLCO1B1Q9Y6L6 691 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 ACACAQ13085 2346 aa13.48□□□□□ -0.25
NECTIN1-203ENST00000341398 A0A1B0GTQ1 180 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 A0A1B0GVM2 712 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 TCAF2A6NFQ2 919 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 MAGEC1O60732 1142 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 DKK1O94907 266 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 ITGAVP06756 1048 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 NUDT1P36639 197 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 CTSOP43234 321 aaPredicted RBP13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 PSMD8P48556 350 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 ARRB1P49407 418 aaPredicted RBP13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 CCDC157Q569K6 752 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 FAM46CQ5VWP2 391 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 SMYD5Q6GMV2 418 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 GBP6Q6ZN66 633 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 PRPF39Q86UA1 669 aaKnown RBP13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 APCDD1Q8J025 514 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 CCAR2Q8N163 923 aaKnown RBP13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 STK40Q8N2I9 435 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 OXR1Q8N573 874 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 PDCD7Q8N8D1 485 aaKnown RBP13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 PTPRN2Q92932 1015 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 MYEOVQ96EZ4 313 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 SPAG5Q96R06 1193 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 FAM129BQ96TA1 746 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 KDM4CQ9H3R0 1056 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 TOR4AQ9NXH8 423 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 DKK4Q9UBT3 224 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 SLC25A13Q9UJS0 675 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 DSPP15924 2871 aaKnown RBP13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 NBEAQ8NFP9 2946 aa13.47□□□□□ -0.25
NECTIN1-203ENST00000341398 URB1O60287 2271 aaKnown RBP13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 E9PAM4 449 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 LDOC1O95751 146 aaPredicted RBP13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 C1SP09871 688 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 PDGFRAP16234 1089 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 ZNF18P17022 549 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 BMP6P22004 513 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 PLK1P53350 603 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 PTK2Q05397 1052 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 CCDC15Q0P6D6 951 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 ZNF177Q13360 481 aaPredicted RBP13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 PDCLQ13371 301 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 ARHGAP44Q17R89 818 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 ACCSLQ4AC99 568 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 LAYNQ6UX15 382 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 MDM1Q8TC05 714 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 OR8D1Q8WZ84 308 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 SERAC1Q96JX3 654 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 PPP1R13BQ96KQ4 1090 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 SLC6A18Q96N87 628 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 ORAI3Q9BRQ5 295 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 ASNSD1Q9NWL6 643 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 DDIT4Q9NX09 232 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 SERGEFQ9UGK8 458 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 XPO7Q9UIA9 1087 aaKnown RBP13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 GPSM3Q9Y4H4 160 aa13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 NYNRINQ9P2P1 1898 aaKnown RBP13.46□□□□□ -0.25
NECTIN1-203ENST00000341398 SYNJ2BP-COX16A0A087WUM0 186 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 TRABD2BA6NFA1 517 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 TLR4O00206 839 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 HSF2BPO75031 334 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 IGLV3-25P01717 112 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 MZF1P28698 734 aaPredicted RBP13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 KRT9P35527 623 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 HNF1BP35680 557 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 IL9RQ01113 521 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 KCNT1Q5JUK3 1230 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 TRIM65Q6PJ69 517 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 C19orf48Q6RUI8 117 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 TMPRSS12Q86WS5 348 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 DEFB106AQ8N104 65 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 RPRD1AQ96P16 312 aaPredicted RBP13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 CRACR2AQ9BSW2 395 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 SYNCQ9H7C4 482 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 TMEM51Q9NW97 253 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 COX16Q9P0S2 106 aa13.45□□□□□ -0.26
NECTIN1-203ENST00000341398 APEX2Q9UBZ4 518 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms