RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 DENND5BQ6ZUT9 1274 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 IQCHQ86VS3 1027 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 CCDC13Q8IYE1 715 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 OR2T34Q8NGX1 318 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 SPATA17Q96L03 361 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 TCHPQ9BT92 498 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 SYNDIG1Q9H7V2 258 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 ELOVL2Q9NXB9 296 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 GTF3C4Q9UKN8 822 aa11.71□□□□□ -0.53
ATXN3-201ENST00000340660 PKDREJQ9NTG1 2253 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 AGRPO00253 132 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 SCAMP1O15126 338 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 PAX3P23760 479 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 ACAT1P24752 427 aaKnown RBP11.7□□□□□ -0.54
ATXN3-201ENST00000340660 CD82P27701 267 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 CDC27P30260 824 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 PPP3CCP48454 512 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 PPP2CBP62714 309 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 PPP2CAP67775 309 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 TMEM164Q5U3C3 297 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 SPATA1Q5VX52 437 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 TMEM215Q68D42 235 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 USP30Q70CQ3 517 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 DUSP23Q9BVJ7 150 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 MRPL4Q9BYD3 311 aaKnown RBP11.7□□□□□ -0.54
ATXN3-201ENST00000340660 TRIM8Q9BZR9 551 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 PLEKHA5Q9HAU0 1116 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 PRSS16Q9NQE7 514 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 CA5BQ9Y2D0 317 aa11.7□□□□□ -0.54
ATXN3-201ENST00000340660 SCN1AP35498 2009 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 LRRC72A6NJI9 287 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 LACTBL1A8MY62 500 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 LATO43561 262 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 MAGEC1O60732 1142 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 MMP20O60882 483 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 LTBQ06643 244 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 OVGP1Q12889 678 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 TAF10Q12962 218 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 PPP2R5AQ15172 486 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 TRIP4Q15650 581 aaPredicted RBP11.69□□□□□ -0.54
ATXN3-201ENST00000340660 NADK2Q4G0N4 442 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 ZRANB3Q5FWF4 1079 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 ZCCHC8Q6NZY4 707 aaKnown RBP11.69□□□□□ -0.54
ATXN3-201ENST00000340660 WFDC8Q8IUA0 241 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 WDR48Q8TAF3 677 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 GANCQ8TET4 914 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 STRADBQ9C0K7 418 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 NEUROG2Q9H2A3 272 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 PABPC3Q9H361 631 aaKnown RBP11.69□□□□□ -0.54
ATXN3-201ENST00000340660 KLHL11Q9NVR0 708 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 FBXL12Q9NXK8 326 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 NCKAP1Q9Y2A7 1128 aa11.69□□□□□ -0.54
ATXN3-201ENST00000340660 MUSKO15146 869 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 HCRTO43612 131 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 BRD2P25440 801 aaKnown RBP11.68□□□□□ -0.54
ATXN3-201ENST00000340660 ITGA3P26006 1051 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 MAGEA11P43364 429 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 ZRSR2Q15696 482 aaKnown RBP11.68□□□□□ -0.54
ATXN3-201ENST00000340660 SKOR2Q2VWA4 1001 aaPredicted RBP11.68□□□□□ -0.54
ATXN3-201ENST00000340660 HTR3DQ70Z44 454 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 SPATA2LQ8IUW3 424 aaPredicted RBP11.68□□□□□ -0.54
ATXN3-201ENST00000340660 PIWIL1Q96J94 861 aaKnown RBP11.68□□□□□ -0.54
ATXN3-201ENST00000340660 SLC45A3Q96JT2 553 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 CCDC3Q9BQI4 270 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 SSBP4Q9BWG4 385 aaPredicted RBP11.68□□□□□ -0.54
ATXN3-201ENST00000340660 SLC29A3Q9BZD2 475 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 CIPCQ9C0C6 399 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 CCSER1Q9C0I3 900 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 RRN3Q9NYV6 651 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 ARHGAP20Q9P2F6 1191 aa11.68□□□□□ -0.54
ATXN3-201ENST00000340660 DIDO1Q9BTC0 2240 aaKnown RBP11.68□□□□□ -0.54
ATXN3-201ENST00000340660 TDRD6O60522 2096 aaKnown RBP11.67□□□□□ -0.54
ATXN3-201ENST00000340660 A0A1W2PP55 124 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 MKRN2OSH3BPM6 223 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 STMND1H3BQB6 276 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 J3QW42 95 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 XPOTO43592 962 aaKnown RBP11.67□□□□□ -0.54
ATXN3-201ENST00000340660 CBX6O95503 412 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 SNRPB2P08579 225 aaKnown RBP11.67□□□□□ -0.54
ATXN3-201ENST00000340660 MAPK10P53779 464 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 FGL2Q14314 439 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 ATP1A1-AS1Q5TC04 95 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 ZNF776Q68DI1 518 aaPredicted RBP11.67□□□□□ -0.54
ATXN3-201ENST00000340660 ANKS1BQ7Z6G8 1248 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 IL22RA1Q8N6P7 574 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 FUBP3Q96I24 572 aaKnown RBP eCLIP11.67□□□□□ -0.54
ATXN3-201ENST00000340660 ACBD6Q9BR61 282 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 HAPLN2Q9GZV7 340 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 FBRSQ9HAH7 460 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 VPS54Q9P1Q0 977 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 BRPF3Q9ULD4 1205 aa11.67□□□□□ -0.54
ATXN3-201ENST00000340660 CUBNO60494 3623 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 NEMP2A6NFY4 417 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 D6RAR5 112 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 DEAF1O75398 565 aaPredicted RBP11.66□□□□□ -0.54
ATXN3-201ENST00000340660 H2AFB1P0C5Y9 115 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 H2AFB2P0C5Z0 115 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 CYP11B2P19099 503 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 CCKBRP32239 447 aa11.66□□□□□ -0.54
ATXN3-201ENST00000340660 SOX18P35713 384 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms