RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PRKCHP24723 683 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 PPM1AP35813 382 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 PPIDQ08752 370 aaKnown RBP11.36□□□□□ -0.59
LRP1-202ENST00000338962 SF3A3Q12874 501 aaKnown RBP eCLIP11.36□□□□□ -0.59
LRP1-202ENST00000338962 PTPRSQ13332 1948 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 HHATQ5VTY9 493 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 PID1Q7Z2X4 250 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 PRPF39Q86UA1 669 aaKnown RBP11.36□□□□□ -0.59
LRP1-202ENST00000338962 TMEM173Q86WV6 379 aaPredicted RBP11.36□□□□□ -0.59
LRP1-202ENST00000338962 RNF168Q8IYW5 571 aaPredicted RBP11.36□□□□□ -0.59
LRP1-202ENST00000338962 TIFAQ96CG3 184 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 FUBP3Q96I24 572 aaKnown RBP eCLIP11.36□□□□□ -0.59
LRP1-202ENST00000338962 ZCWPW1Q9H0M4 648 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 SMOC2Q9H3U7 446 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 SPG21Q9NZD8 308 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 IGSF9Q9P2J2 1179 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 CAPN7Q9Y6W3 813 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 ZNF638Q14966 1978 aaKnown RBP11.36□□□□□ -0.59
LRP1-202ENST00000338962 NLRC5Q86WI3 1866 aa11.36□□□□□ -0.59
LRP1-202ENST00000338962 GOLGA8RI6L899 631 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 SNX3O60493 162 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 KRT37O76014 449 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 CCR1P32246 355 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 PBX3P40426 434 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 BRMS1LQ5PSV4 323 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 VARS2Q5ST30 1063 aaKnown RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 SPOUT1Q5T280 376 aaKnown RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 LGSNQ5TDP6 509 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 TTC39BQ5VTQ0 682 aaPredicted RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 RWDD4Q6NW29 188 aaKnown RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 LRRC8BQ6P9F7 803 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 MPP5Q8N3R9 675 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 HDAC11Q96DB2 347 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 STAMBPL1Q96FJ0 436 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 TACO1Q9BSH4 297 aaKnown RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 C17orf80Q9BSJ5 609 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 SIK2Q9H0K1 926 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 NKX2-4Q9H2Z4 354 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 CXorf56Q9H5V9 222 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 SLC28A3Q9HAS3 691 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 PLAC1Q9HBJ0 212 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 ADAM28Q9UKQ2 775 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 SNX10Q9Y5X0 201 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 TMEM265A0A087WTH1 108 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 SDR42E2A6NKP2 422 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 NT5C1B-RDH14C9J2C7 533 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 TM9SF1O15321 606 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 C1QAP02745 245 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 SRGAP2BP0DMP2 458 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 TAC1P20366 129 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 PTPN3P26045 913 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 GARSP41250 739 aaKnown RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 GALNT2Q10471 571 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 LVRNQ6Q4G3 990 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 CEP57Q86XR8 500 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 BCL7CQ8WUZ0 217 aaPredicted RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 KLF6Q99612 283 aaPredicted RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 OSBPL2Q9H1P3 480 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 ARHGEF38Q9NXL2 777 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 STK39Q9UEW8 545 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 ZNF180Q9UJW8 692 aa11.35□□□□□ -0.59
LRP1-202ENST00000338962 USP15Q9Y4E8 981 aaPredicted RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 FNDC1Q4ZHG4 1894 aaPredicted RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 COL4A4P53420 1690 aaPredicted RBP11.35□□□□□ -0.59
LRP1-202ENST00000338962 PATJQ8NI35 1801 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 MSI1O43347 362 aaKnown RBP11.34□□□□□ -0.59
LRP1-202ENST00000338962 LPXNO60711 386 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 FGF18O76093 207 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 SUN1O94901 812 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 HNRNPH1P31943 449 aaKnown RBP11.34□□□□□ -0.59
LRP1-202ENST00000338962 MNAT1P51948 309 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 SESN2P58004 480 aaPredicted RBP11.34□□□□□ -0.59
LRP1-202ENST00000338962 SLC1A5Q15758 541 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 PDK4Q16654 411 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 CTXN3Q4LDR2 81 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 FAM171A1Q5VUB5 890 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 PPP2R2DQ66LE6 453 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 ZNF280DQ6N043 979 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 DDX53Q86TM3 631 aaKnown RBP11.34□□□□□ -0.59
LRP1-202ENST00000338962 CCNJLQ8IV13 435 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 NUP93Q8N1F7 819 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 BANPQ8N9N5 519 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 KLHL23Q8NBE8 558 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 LRRC8CQ8TDW0 803 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 CASP10Q92851 521 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 PGLYRP2Q96PD5 576 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 HAPLN3Q96S86 360 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 TRIM56Q9BRZ2 755 aaKnown RBP11.34□□□□□ -0.59
LRP1-202ENST00000338962 NAT9Q9BTE0 207 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 PITPNM3Q9BZ71 974 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 FBXO44Q9H4M3 255 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 SFMBT1Q9UHJ3 866 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 LZTS1Q9Y250 596 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 PCDHB5Q9Y5E4 795 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.34□□□□□ -0.59
LRP1-202ENST00000338962 A0A1W2PQH9 124 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 WDR27A2RRH5 827 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 CXorf49A8MYA2 514 aaPredicted RBP11.34□□□□□ -0.59
LRP1-202ENST00000338962 PAGE1O75459 146 aa11.34□□□□□ -0.59
LRP1-202ENST00000338962 KRT38O76015 456 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms