RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NAB1Q13506 487 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TMC7Q7Z402 723 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 PIWIL2Q8TC59 973 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 DCLRE1BQ9H816 532 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 MPP6Q9NZW5 540 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CCNB1P14635 433 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SYPL2Q5VXT5 272 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 LRRC8EQ6NSJ5 796 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 DDI1Q8WTU0 396 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TUBGCP3Q96CW5 907 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ENTPD7Q9NQZ7 604 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 MARCH2Q9P0N8 246 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SLCO1B7G3V0H7 640 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SOAT2O75908 522 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 DGKIO75912 1065 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 RGS4P49798 205 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CCDC15Q0P6D6 951 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 BST1Q10588 318 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 BTG3Q14201 252 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 BRMS1LQ5PSV4 323 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 FAM228AQ86W67 206 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CCDC185Q8N715 623 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 HAPLN2Q9GZV7 340 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 VCX3AQ9NNX9 186 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ARHGEF4Q9NR80 690 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SMPD4Q9NXE4 827 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CNTN3Q9P232 1028 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CDYLQ9Y232 598 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 PCDHA11Q9Y5I1 949 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 NUP188Q5SRE5 1749 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ZNF197O14709 1029 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 BUD23O43709 281 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 DNAJC8O75937 253 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 STAU1O95793 577 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SLC1A6P48664 564 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 NRLP54845 237 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 OASLQ15646 514 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 PACS1Q6VY07 963 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ZNF398Q8TD17 642 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 DQX1Q8TE96 717 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CDHR5Q9HBB8 845 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ARMCX1Q9P291 453 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SLC17A7Q9P2U7 560 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 LRP5O75197 1615 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 H2AFYO75367 372 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 HIST1H2AGP0C0S8 130 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 HIST1H2ADP20671 130 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 GRB14Q14449 540 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 WDTC1Q8N5D0 677 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SLC44A1Q8WWI5 657 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 RSPH1Q8WYR4 309 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 USP13Q92995 863 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 HIST1H2AHQ96KK5 128 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 HIST1H2AJQ99878 128 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 H2AFJQ9BTM1 129 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 RNF208Q9H0X6 261 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 COL16A1Q07092 1604 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 UNC5CO95185 931 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 NAGLUP54802 743 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 WNT7BP56706 349 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 PRKCZQ05513 592 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TRIP10Q15642 601 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SLC1A5Q15758 541 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 NEPROQ6NW34 567 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ADGRD1Q6QNK2 874 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 FAR2Q96K12 515 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 FCRL2Q96LA5 508 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 FTHL17Q9BXU8 183 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 DTLQ9NZJ0 730 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TPP1O14773 563 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 PHGDHO43175 533 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ITGA2BP08514 1039 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 DDX5P17844 614 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TPSB2P20231 275 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 WARSP23381 471 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 HADHAP40939 763 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CDK7P50613 346 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CSE1LP55060 971 aaKnown RBP6.42□□□□□ -1.38
PRKDC-202ENST00000338368 TPSAB1Q15661 275 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 SEL1L3Q68CR1 1132 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ZNF470Q6ECI4 717 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 OTOAQ7RTW8 1153 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 MON1AQ86VX9 555 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 CARNMT1Q8N4J0 409 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 ATAD1Q8NBU5 361 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 OSBPL1AQ9BXW6 950 aa6.42□□□□□ -1.38
PRKDC-202ENST00000338368 RNF103-CHMP3A0A140T963 221 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 FAM95CA0A1B0GW59 222 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 CCL23P55773 120 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 INTS6LQ5JSJ4 861 aaKnown RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 RNF43Q68DV7 783 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 SPPL2BQ8TCT7 592 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 PHACTR1Q9C0D0 580 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 POLR1EQ9GZS1 481 aaKnown RBP6.41□□□□□ -1.38
PRKDC-202ENST00000338368 VRTNQ9H8Y1 702 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 PCDHB8Q9UN66 801 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 VPS9D1Q9Y2B5 631 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 Q9Y3F1 56 aa6.41□□□□□ -1.38
PRKDC-202ENST00000338368 NR2E3Q9Y5X4 410 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms