RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 NCANO14594 1321 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 IST1P53990 364 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 BCAT1P54687 386 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 FNIP1Q8TF40 1166 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 CHID1Q9BWS9 393 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 EPB41L4BQ9H329 900 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 USP29Q9HBJ7 922 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 CYP4F12Q9HCS2 524 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 ABCB10Q9NRK6 738 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 CD274Q9NZQ7 290 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 HEMK1Q9Y5R4 338 aaPredicted RBP16.37■□□□□ 0.21
NPHP3-201ENST00000337331 ASTN1O14525 1302 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 ALBP02768 609 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 CHRM3P20309 590 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 MGAT5BQ3V5L5 792 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 METTL7BQ6UX53 244 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 SEC14L1Q92503 715 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 DGCR6LQ9BY27 220 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 UBP1Q9NZI7 540 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 TSPAN16Q9UKR8 245 aa16.37■□□□□ 0.21
NPHP3-201ENST00000337331 CCL15-CCL14A0A0B4J2E2 113 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 HIST1H2AGP0C0S8 130 aaPredicted RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 HIST1H2ADP20671 130 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 CCL15Q16663 113 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 CCDC81Q6ZN84 652 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 FAM83AQ86UY5 434 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 HIST1H2AHQ96KK5 128 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 SEPT5Q99719 369 aaPredicted RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 HIST1H2AJQ99878 128 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 H2AFJQ9BTM1 129 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 PIH1D1Q9NWS0 290 aaKnown RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 PKP3Q9Y446 797 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 COL5A2P05997 1499 aaPredicted RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 SYNDIG1LA6NDD5 238 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 FSCN2O14926 492 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 EIF2S1P05198 315 aaKnown RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 CYP3A4P08684 503 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 NUMBP49757 651 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 ZNF484Q5JVG2 852 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 DACT2Q5SW24 774 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 CPNE8Q86YQ8 564 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 IARS2Q9NSE4 1012 aaKnown RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 COPG2Q9UBF2 871 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 TRPC5OSA6NMA1 111 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 GRK2P25098 689 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 RAB15P59190 212 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 PAN2Q504Q3 1202 aaKnown RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 AHI1Q8N157 1196 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 ADCY4Q8NFM4 1077 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 TUBGCP3Q96CW5 907 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 SYBUQ9NX95 663 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 ABI2Q9NYB9 513 aaPredicted RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 STK39Q9UEW8 545 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 LYPLA1O75608 230 aaPredicted RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 PSMD10O75832 226 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 GABBR2O75899 941 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 GSNP06396 782 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 CYP2F1P24903 491 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 NDST1P52848 882 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 TRIM60Q495X7 471 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 PPM1LQ5SGD2 360 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 FAAH2Q6GMR7 532 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 PAOXQ6QHF9 649 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 RAD21L1Q9H4I0 556 aa16.36■□□□□ 0.21
NPHP3-201ENST00000337331 SAE1Q9UBE0 346 aaPredicted RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 RUVBL2Q9Y230 463 aaKnown RBP16.36■□□□□ 0.21
NPHP3-201ENST00000337331 ADAMTS3O15072 1205 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 RHOBTB1O94844 696 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 TTKP33981 857 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 ACADVLP49748 655 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 CLK1P49759 484 aaKnown RBP16.35■□□□□ 0.21
NPHP3-201ENST00000337331 TLR1Q15399 786 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 SGO1Q5FBB7 561 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 TJAP1Q5JTD0 557 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 SEL1L3Q68CR1 1132 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 PTRHD1Q6GMV3 140 aaKnown RBP16.35■□□□□ 0.21
NPHP3-201ENST00000337331 AKAP14Q86UN6 197 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 COLGALT1Q8NBJ5 622 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 BLOC1S5Q8TDH9 187 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 TRIM63Q969Q1 353 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 CIB1Q99828 191 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 GAKO14976 1311 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 MYH13Q9UKX3 1938 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 COX4I1P13073 169 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 OR1G1P47890 313 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 KCNK10P57789 538 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 DEFA1P59665 94 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 DEFA3P59666 94 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 LSM3P62310 102 aaKnown RBP16.35■□□□□ 0.21
NPHP3-201ENST00000337331 AGAP9Q5VTM2 703 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 C14orf80Q86SX3 495 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 PPP1R2P1Q96PQ5 205 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 ADAMTS6Q9UKP5 1117 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 ACOT9Q9Y305 439 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 DGKBQ9Y6T7 804 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 H3BNX3 289 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 VWA5AO00534 786 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 RAD51BO15315 384 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 F9P00740 461 aa16.35■□□□□ 0.21
NPHP3-201ENST00000337331 MIPP30301 263 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms