RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SEMA3DO95025 777 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 POLR2LP62875 67 aaKnown RBP13.32□□□□□ -0.28
HLCS-201ENST00000336648 GLRA4Q5JXX5 417 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 LPCAT1Q8NF37 534 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 SERAC1Q96JX3 654 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 PXMP2Q9NR77 195 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 RAB21Q9UL25 225 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 CDC42BPBQ9Y5S2 1711 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 CBX4O00257 560 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 TSPAN19P0C672 248 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 ELK3P41970 407 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 HUNKP57058 714 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 SV2AQ7L0J3 742 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 MCCC1Q96RQ3 725 aaPredicted RBP13.32□□□□□ -0.28
HLCS-201ENST00000336648 TBL1YQ9BQ87 522 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 DCUN1D5Q9BTE7 237 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 DDX20Q9UHI6 824 aaKnown RBP13.32□□□□□ -0.28
HLCS-201ENST00000336648 A0A096LPK6 155 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 CCDC182A6NF36 153 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 ACADMP11310 421 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 VAV1P15498 845 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 S100A1P23297 94 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 RPL3P39023 403 aaKnown RBP13.31□□□□□ -0.28
HLCS-201ENST00000336648 FAM117BQ6P1L5 589 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 ELOVL4Q9GZR5 314 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 MID1IP1Q9NPA3 183 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 ADAM28Q9UKQ2 775 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 INPP4BO15327 924 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 SCNN1BP51168 640 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 CLCN3P51790 818 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 ZNF410Q86VK4 478 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 METTL6Q8TCB7 284 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 LENG9Q96B70 501 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 SLC9A7Q96T83 725 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 MRPL9Q9BYD2 267 aaKnown RBP13.31□□□□□ -0.28
HLCS-201ENST00000336648 NFKBIZQ9BYH8 718 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 ARHGAP20Q9P2F6 1191 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 CRNNQ9UBG3 495 aaPredicted RBP13.31□□□□□ -0.28
HLCS-201ENST00000336648 CORO2BQ9UQ03 480 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 ALDH2P05091 517 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 EIF4BP23588 611 aaKnown RBP13.31□□□□□ -0.28
HLCS-201ENST00000336648 DSG3P32926 999 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 OAZ1P54368 228 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 ARF5P84085 180 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 ZNF655Q8N720 491 aaPredicted RBP13.31□□□□□ -0.28
HLCS-201ENST00000336648 ARL10Q8N8L6 244 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 POMGNT2Q8NAT1 580 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 ITFG1Q8TB96 612 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 EURLQ9NYK6 297 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 CHKBQ9Y259 395 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 PCDHB12Q9Y5F1 795 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 ACTL7BQ9Y614 415 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 KCNQ2O43526 872 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 SEC22BO75396 215 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 CKBP12277 381 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 TNNI3P19429 210 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 PBLDP30039 288 aaPredicted RBP13.31□□□□□ -0.28
HLCS-201ENST00000336648 S100A3P33764 101 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 SRP54P61011 504 aaKnown RBP13.31□□□□□ -0.28
HLCS-201ENST00000336648 AMHR2Q16671 573 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 LIN54Q6MZP7 749 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 TMC3Q7Z5M5 1100 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 SLC47A2Q86VL8 602 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 RACGAP1Q9H0H5 632 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 LIMD1Q9UGP4 676 aa13.31□□□□□ -0.28
HLCS-201ENST00000336648 AKAP3O75969 853 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 RAB2AP61019 212 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 BNC1Q01954 994 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 TCP10LQ8TDR4 215 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 BBS4Q96RK4 519 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 SENP2Q9HC62 589 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 CCDC59Q9P031 241 aaKnown RBP13.3□□□□□ -0.28
HLCS-201ENST00000336648 SMIM11AP58511 58 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 TTC23Q5W5X9 447 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 CAMK1DQ8IU85 385 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 ZCCHC9Q8N567 271 aaKnown RBP13.3□□□□□ -0.28
HLCS-201ENST00000336648 RIOX1Q9H6W3 641 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 A0A0G2JLW4 131 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 HS6ST1O60243 411 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 EPN2O95208 641 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 DGKAP23743 735 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 CXCR2P25025 360 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 SPIRE1Q08AE8 756 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 LAMTOR4Q0VGL1 99 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 OVOS1Q6IE37 1185 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 B3GNT6Q6ZMB0 384 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 LRRC74BQ6ZQY2 392 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 Q96MT0 163 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 SPATA5L1Q9BVQ7 753 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 REEP1Q9H902 201 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 GPRC5CQ9NQ84 441 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 LRRC4BQ9NT99 713 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 DDX43Q9NXZ2 648 aaKnown RBP13.3□□□□□ -0.28
HLCS-201ENST00000336648 EHD3Q9NZN3 535 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 CCDC162PA2VCL2 907 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 APOC4-APOC2K7ER74 178 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 C2CD2LO14523 706 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 APOC2P02655 101 aa13.3□□□□□ -0.28
HLCS-201ENST00000336648 ARP10275 920 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms