RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 VANGL2Q9ULK5 521 aa12.75□□□□□ -0.37
ZNF548-201ENST00000336128 PCDHA11Q9Y5I1 949 aa12.75□□□□□ -0.37
ZNF548-201ENST00000336128 SDR42E2A6NKP2 422 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 TRDMT1O14717 391 aaKnown RBP12.74□□□□□ -0.37
ZNF548-201ENST00000336128 SEC24AO95486 1093 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 AP2A1O95782 977 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 IGLV3-27P01718 113 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 INHBAP08476 426 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 DRD4P21917 467 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 WDR5P61964 334 aaKnown RBP12.74□□□□□ -0.37
ZNF548-201ENST00000336128 STEAP4Q687X5 459 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 CMTR2Q8IYT2 770 aaKnown RBP12.74□□□□□ -0.37
ZNF548-201ENST00000336128 PPM1NQ8N819 430 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 ZSCAN18Q8TBC5 510 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-201ENST00000336128 DYDC1Q8WWB3 177 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 CHMP6Q96FZ7 201 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 TMEM169Q96HH4 297 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 BTN2A3PQ96KV6 586 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 TEKT5Q96M29 485 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 MLXIPLQ9NP71 852 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 SMYD2Q9NRG4 433 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 PIH1D1Q9NWS0 290 aaKnown RBP12.74□□□□□ -0.37
ZNF548-201ENST00000336128 IKBKGQ9Y6K9 419 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 FAM47DPA6NHR8 397 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 ARHGAP42A6NI28 874 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 CXorf49A8MYA2 514 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-201ENST00000336128 KIAA0355O15063 1070 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 PRPF4O43172 522 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZNF548-201ENST00000336128 TLR5O60602 858 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 SUN1O94901 812 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 RHOQP17081 205 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 LAG3P18627 525 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 CRADDP78560 199 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 DSG1Q02413 1049 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 BTG3Q14201 252 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-201ENST00000336128 RAP1GAP2Q684P5 730 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 KCTD11Q693B1 232 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 CTAGE3PQ8IX95 158 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 ZNF317Q96PQ6 595 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-201ENST00000336128 SYBUQ9NX95 663 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 FNIP2Q9P278 1114 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 PPARGC1AQ9UBK2 798 aaKnown RBP12.74□□□□□ -0.37
ZNF548-201ENST00000336128 SHROOM3Q8TF72 1996 aa12.74□□□□□ -0.37
ZNF548-201ENST00000336128 IQANK1A0A1B0GTG1 560 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 FAM159BA6NKW6 160 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 MAFKO60675 156 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 ACRP10323 421 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 RING1Q06587 406 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 OLIG2Q13516 323 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 QPCTQ16769 361 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 CASC4Q6P4E1 433 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 TRMT10BQ6PF06 316 aaKnown RBP12.73□□□□□ -0.37
ZNF548-201ENST00000336128 TAX1BP1Q86VP1 789 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 SLC26A11Q86WA9 606 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 CNTD1Q8N815 330 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 OR52K1Q8NGK4 314 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 ZYG11BQ9C0D3 744 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 NOL6Q9H6R4 1146 aaKnown RBP12.73□□□□□ -0.37
ZNF548-201ENST00000336128 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 SMG5Q9UPR3 1016 aaKnown RBP12.73□□□□□ -0.37
ZNF548-201ENST00000336128 BRCA2P51587 3418 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 NYNRINQ9P2P1 1898 aaKnown RBP12.73□□□□□ -0.37
ZNF548-201ENST00000336128 ERI2A8K979 691 aaKnown RBP12.73□□□□□ -0.37
ZNF548-201ENST00000336128 EFCAB14O75071 495 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 ABLIM3O94929 683 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 CCNB1P14635 433 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 RAG1P15918 1043 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 PGAM1P18669 254 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 PAPOLAP51003 745 aaKnown RBP12.73□□□□□ -0.37
ZNF548-201ENST00000336128 PRPSAP1Q14558 356 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 TIGD7Q6NT04 549 aaPredicted RBP12.73□□□□□ -0.37
ZNF548-201ENST00000336128 OTOP3Q7RTS5 596 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 PDZD8Q8NEN9 1154 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 GDAP1Q8TB36 358 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 CKAP2Q8WWK9 683 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 ARNTL2Q8WYA1 636 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 OVCA2Q8WZ82 227 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 CDK5RAP1Q96SZ6 601 aaKnown RBP12.73□□□□□ -0.37
ZNF548-201ENST00000336128 IL12RB2Q99665 862 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 SSU72Q9NP77 194 aaKnown RBP12.73□□□□□ -0.37
ZNF548-201ENST00000336128 CASS4Q9NQ75 786 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 TMEM248Q9NWD8 314 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 SPG21Q9NZD8 308 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 YIPF1Q9Y548 306 aa12.73□□□□□ -0.37
ZNF548-201ENST00000336128 IGLV3-10A0A075B6K4 115 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 MATN3O15232 486 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 USP12O75317 370 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 FAM155BO75949 473 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 CNTN5O94779 1100 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 MT-ND3P03897 115 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 CSH1P0DML2 217 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 CSH2P0DML3 217 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 HSPA8P11142 646 aaKnown RBP12.72□□□□□ -0.37
ZNF548-201ENST00000336128 KPNA1P52294 538 aaPredicted RBP12.72□□□□□ -0.37
ZNF548-201ENST00000336128 SLC18A1P54219 525 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 ALFQ53S48 1182 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 NUGGCQ68CJ6 796 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 TPGS2Q68CL5 300 aa12.72□□□□□ -0.37
ZNF548-201ENST00000336128 TFAP2DQ7Z6R9 452 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms