RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ETS1P14921 441 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 SLC10A6Q3KNW5 377 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 INTS6LQ5JSJ4 861 aaKnown RBP15.3■□□□□ 0.04
C9orf47-201ENST00000334490 GRTP1Q5TC63 336 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 POLNQ7Z5Q5 900 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 LRRC49Q8IUZ0 686 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 OTULINQ96BN8 352 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 PANX3Q96QZ0 392 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 TMBIM4Q9HC24 238 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 PLK2Q9NYY3 685 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 CRYL1Q9Y2S2 319 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 ERBB2P04626 1255 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 MMP8P22894 467 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 HNRNPH3P31942 346 aaKnown RBP15.3■□□□□ 0.04
C9orf47-201ENST00000334490 BRMS1LQ5PSV4 323 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 BBS12Q6ZW61 710 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 TRAPPC5Q8IUR0 188 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 ICA1LQ8NDH6 482 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 NAF1Q96HR8 494 aaKnown RBP15.3■□□□□ 0.04
C9orf47-201ENST00000334490 MBOAT7Q96N66 472 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 FZD8Q9H461 694 aa15.3■□□□□ 0.04
C9orf47-201ENST00000334490 SNED1Q8TER0 1413 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 NCANO14594 1321 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 A0A096LPK6 155 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 MSI1O43347 362 aaKnown RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 CCNT2O60583 730 aaKnown RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 EOMESO95936 686 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 IL1BP01584 269 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 CYP2A7P20853 494 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 GPC1P35052 558 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 SH3BGRP55822 239 aaPredicted RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 TP53BP2Q13625 1128 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 SLC25A52Q3SY17 297 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 RARS2Q5T160 578 aaKnown RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 SIAH1Q8IUQ4 282 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 SNX27Q96L92 541 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 SEZ6LQ9BYH1 1024 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 WARS2Q9UGM6 360 aaKnown RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 A0A0U1RQJ8 604 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 RCCD1A6NED2 376 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 CDK16Q00536 496 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 CDC16Q13042 620 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 SEL1L3Q68CR1 1132 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 MCOLN3Q8TDD5 553 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 ACOX2Q99424 681 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 LGMNQ99538 433 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 CCDC3Q9BQI4 270 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 THUMPD3Q9BV44 507 aaKnown RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 ATP13A3Q9H7F0 1226 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 NINJ2Q9NZG7 142 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 GMIPQ9P107 970 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 CFAP97Q9P2B7 532 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 DNAJC16Q9Y2G8 782 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 COL1A1P02452 1464 aaPredicted RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 ZNF536O15090 1300 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 GNG14A0A1W2PPG7 69 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 FAM107AO95990 144 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 PCNAP12004 261 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 GRK2P25098 689 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 FMO4P31512 558 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 SP2Q02086 613 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 STX5Q13190 355 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 MED8Q96G25 268 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 SERAC1Q96JX3 654 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 PCDHB18PQ96TA0 734 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 ECSITQ9BQ95 431 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 NTPCRQ9BSD7 190 aaKnown RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 TDRKHQ9Y2W6 561 aaKnown RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 SNX5Q9Y5X3 404 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 ARVCFO00192 962 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 ADAMTS3O15072 1205 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 PAGE1O75459 146 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 STAU1O95793 577 aaKnown RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 PTPN3P26045 913 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 TAS2R40P59535 323 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 PDE1CQ14123 709 aaPredicted RBP15.29■□□□□ 0.04
C9orf47-201ENST00000334490 NAT16Q8N8M0 369 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 RBBP8Q99708 897 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 IL22Q9GZX6 179 aa15.29■□□□□ 0.04
C9orf47-201ENST00000334490 C1QTNF3-AMACRE9PGA6 284 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 MDM4O15151 490 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 ERVK-10P10266 1014 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 MAPK9P45984 424 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 MAXP61244 160 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 EIF2B5Q13144 721 aaKnown RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 N4BP2L1Q5TBK1 243 aaPredicted RBP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 RASAL3Q86YV0 1011 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 DTX3LQ8TDB6 740 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 LRRC39Q96DD0 335 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 TEPSINQ96N21 525 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 ANKZF1Q9H8Y5 726 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.28■□□□□ 0.04
C9orf47-201ENST00000334490 GTF2IRD1Q9UHL9 959 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 LRRC37A3O60309 1634 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 MGAT4DA6NG13 374 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 CCL16O15467 120 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 AKAP10O43572 662 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 MT-CO1P00395 513 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 MPOP05164 745 aa15.28■□□□□ 0.04
C9orf47-201ENST00000334490 MAGEA9P43362 315 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms