RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 APCDD1Q8J025 514 aa16.84■□□□□ 0.29
C11orf88-201ENST00000332814 ZNF564Q8TBZ8 553 aaPredicted RBP16.84■□□□□ 0.29
C11orf88-201ENST00000332814 LMLNQ96KR4 655 aa16.84■□□□□ 0.29
C11orf88-201ENST00000332814 CHP1Q99653 195 aa16.84■□□□□ 0.29
C11orf88-201ENST00000332814 EPC1Q9H2F5 836 aa16.84■□□□□ 0.29
C11orf88-201ENST00000332814 SUN2Q9UH99 717 aa16.84■□□□□ 0.29
C11orf88-201ENST00000332814 PCSK1NQ9UHG2 260 aa16.84■□□□□ 0.29
C11orf88-201ENST00000332814 INTS6Q9UL03 887 aaKnown RBP16.84■□□□□ 0.29
C11orf88-201ENST00000332814 FZD10Q9ULW2 581 aa16.84■□□□□ 0.29
C11orf88-201ENST00000332814 SMG5Q9UPR3 1016 aaKnown RBP16.84■□□□□ 0.29
C11orf88-201ENST00000332814 ERVW-1Q9UQF0 538 aa16.84■□□□□ 0.29
C11orf88-201ENST00000332814 TBC1D30Q9Y2I9 924 aa16.84■□□□□ 0.29
C11orf88-201ENST00000332814 A0A1W2PQF6 199 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 MYO1FO00160 1098 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 GFRA3O60609 400 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 LRIG2O94898 1065 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 HLA-EP13747 358 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 RHOQP17081 205 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 GABRG2P18507 467 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 L1CAMP32004 1257 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 NUMBP49757 651 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 PLK1P53350 603 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 ENPP2Q13822 863 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 PTPRNQ16849 979 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 TC2NQ8N9U0 490 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 KDM1BQ8NB78 822 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 C2orf49Q9BVC5 232 aaPredicted RBP16.83■□□□□ 0.28
C11orf88-201ENST00000332814 TRIM7Q9C029 511 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 RETREG1Q9H6L5 497 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 CATSPERBQ9H7T0 1116 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 SPTLC3Q9NUV7 552 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 UVRAGQ9P2Y5 699 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 NCDNQ9UBB6 729 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 LCMT1Q9UIC8 334 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 GMEB2Q9UKD1 530 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 AP4E1Q9UPM8 1137 aa16.83■□□□□ 0.28
C11orf88-201ENST00000332814 PRR23AA6NEV1 266 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 EIF3CLB5ME19 914 aaKnown RBP16.82■□□□□ 0.28
C11orf88-201ENST00000332814 HRO43593 1189 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ZNF217O75362 1048 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 TMEM253P0C7T8 217 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ACADMP11310 421 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 NDUFV2P19404 249 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 EPHB2P29323 1055 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 MIPP30301 263 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ETFBP38117 255 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 SSR1P43307 286 aaKnown RBP16.82■□□□□ 0.28
C11orf88-201ENST00000332814 MAPKAPK2P49137 400 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 MRE11P49959 708 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 TPI1P60174 286 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ZNF252P-AS1Q0IIN9 211 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ELF2Q15723 593 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 LPAL2Q16609 132 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ASTE1Q2TB18 679 aaPredicted RBP16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ERMARDQ5T6L9 678 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ZNF783Q6ZMS7 281 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ZNF366Q8N895 744 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 PRCCQ92733 491 aaPredicted RBP16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ARHGEF26Q96DR7 871 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 EIF3CQ99613 913 aaKnown RBP16.82■□□□□ 0.28
C11orf88-201ENST00000332814 FEM1AQ9BSK4 669 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 TMEM245Q9H330 911 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 DHX35Q9H5Z1 703 aaKnown RBP16.82■□□□□ 0.28
C11orf88-201ENST00000332814 FBRSQ9HAH7 460 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 PRDM16Q9HAZ2 1276 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 ATP13A1Q9HD20 1204 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 LUC7LQ9NQ29 371 aaKnown RBP16.82■□□□□ 0.28
C11orf88-201ENST00000332814 NENFQ9UMX5 172 aa16.82■□□□□ 0.28
C11orf88-201ENST00000332814 CACNA1IQ9P0X4 2223 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 ILVBLA1L0T0 632 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 FAM72CH0Y354 149 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 MAP3K13O43283 966 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 DAPK3O43293 454 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 IPO7O95373 1038 aaKnown RBP16.81■□□□□ 0.28
C11orf88-201ENST00000332814 HTR7P34969 479 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 PCK1P35558 622 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 CYLC1P35663 651 aaPredicted RBP16.81■□□□□ 0.28
C11orf88-201ENST00000332814 CTSOP43234 321 aaPredicted RBP16.81■□□□□ 0.28
C11orf88-201ENST00000332814 SPA17Q15506 151 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 ACCSLQ4AC99 568 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 FAM72AQ5TYM5 149 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 MANEALQ5VSG8 457 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 IL31Q6EBC2 164 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 LAIR1Q6GTX8 287 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 FAM72DQ6L9T8 149 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 FAM72BQ86X60 149 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 ZNF354CQ86Y25 554 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 CACUL1Q86Y37 369 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 PYROXD2Q8N2H3 581 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 DCAF4L2Q8NA75 395 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 OR2T3Q8NH03 318 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 RPL10LQ96L21 214 aaKnown RBP16.81■□□□□ 0.28
C11orf88-201ENST00000332814 MRGPRX1Q96LB2 322 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 SPON2Q9BUD6 331 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 SNRNP25Q9BV90 132 aaKnown RBP16.81■□□□□ 0.28
C11orf88-201ENST00000332814 PACSIN1Q9BY11 444 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 TMEM248Q9NWD8 314 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 GPATCH2LQ9NWQ4 482 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 DONSONQ9NYP3 566 aa16.81■□□□□ 0.28
C11orf88-201ENST00000332814 USP18Q9UMW8 372 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms