RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 C6orf118Q5T5N4 469 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 CXorf57Q6NSI4 855 aaKnown RBP14.41□□□□□ -0.1
LIMS1-201ENST00000332345 KIAA1211LQ6NV74 962 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 APCDD1Q8J025 514 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 CCDC185Q8N715 623 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 MRFAP1L1Q96HT8 127 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 THAP2Q9H0W7 228 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 MUC3BQ9H195 1237 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 CD248Q9HCU0 757 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 MPP6Q9NZW5 540 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 SMG5Q9UPR3 1016 aaKnown RBP14.41□□□□□ -0.1
LIMS1-201ENST00000332345 ERVW-1Q9UQF0 538 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 EML5Q05BV3 1969 aa14.41□□□□□ -0.1
LIMS1-201ENST00000332345 SDK1Q7Z5N4 2213 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 MAP3K13O43283 966 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 ZNF217O75362 1048 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 RHOBTB1O94844 696 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 CYP1A2P05177 515 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 RHOCP08134 193 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 PRKCHP24723 683 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 L1CAMP32004 1257 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 IRAK1P51617 712 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 GALCP54803 685 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 GFPT1Q06210 699 aaPredicted RBP14.4□□□□□ -0.1
LIMS1-201ENST00000332345 PIGHQ14442 188 aaPredicted RBP14.4□□□□□ -0.1
LIMS1-201ENST00000332345 ASTE1Q2TB18 679 aaPredicted RBP14.4□□□□□ -0.1
LIMS1-201ENST00000332345 RWDD4Q6NW29 188 aaKnown RBP14.4□□□□□ -0.1
LIMS1-201ENST00000332345 ZNF783Q6ZMS7 281 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 TMPRSS6Q8IU80 811 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 RUBCNQ92622 972 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 ZC3H10Q96K80 434 aaKnown RBP14.4□□□□□ -0.1
LIMS1-201ENST00000332345 SPACA7Q96KW9 195 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 MRGPRX1Q96LB2 322 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 CHP1Q99653 195 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 NHEJ1Q9H9Q4 299 aaPredicted RBP14.4□□□□□ -0.1
LIMS1-201ENST00000332345 FBRSQ9HAH7 460 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 PRDM16Q9HAZ2 1276 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 VPS28Q9UK41 221 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 FZD10Q9ULW2 581 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 RIF1Q5UIP0 2472 aaKnown RBP14.4□□□□□ -0.1
LIMS1-201ENST00000332345 PIEZO1Q92508 2521 aa14.4□□□□□ -0.1
LIMS1-201ENST00000332345 PTPRZ1P23471 2315 aaPredicted RBP14.4□□□□□ -0.11
LIMS1-201ENST00000332345 ILVBLA1L0T0 632 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 MYO1FO00160 1098 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 PRPSAP2O60256 369 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 LRIG2O94898 1065 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 H2AFZP0C0S5 128 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 HLA-EP13747 358 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 RHOQP17081 205 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 NDUFV2P19404 249 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 P2RY2P41231 377 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 VASPP50552 380 aaPredicted RBP14.39□□□□□ -0.11
LIMS1-201ENST00000332345 CAMK2GQ13555 558 aaPredicted RBP14.39□□□□□ -0.11
LIMS1-201ENST00000332345 ELF2Q15723 593 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 ERMARDQ5T6L9 678 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 LAIR1Q6GTX8 287 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 H2AFVQ71UI9 128 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.39□□□□□ -0.11
LIMS1-201ENST00000332345 TFAP2DQ7Z6R9 452 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 METTL3Q86U44 580 aaKnown RBP14.39□□□□□ -0.11
LIMS1-201ENST00000332345 CTNNBL1Q8WYA6 563 aaPredicted RBP14.39□□□□□ -0.11
LIMS1-201ENST00000332345 PRCCQ92733 491 aaPredicted RBP14.39□□□□□ -0.11
LIMS1-201ENST00000332345 TBC1D31Q96DN5 1066 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 ERLEC1Q96DZ1 483 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 ALG14Q96F25 216 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 SIPA1Q96FS4 1042 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 LOXL4Q96JB6 756 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 RPL10LQ96L21 214 aaKnown RBP14.39□□□□□ -0.11
LIMS1-201ENST00000332345 EPAS1Q99814 870 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 HINFPQ9BQA5 517 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 C2orf49Q9BVC5 232 aaPredicted RBP14.39□□□□□ -0.11
LIMS1-201ENST00000332345 NUP85Q9BW27 656 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 TRIM7Q9C029 511 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 DONSONQ9NYP3 566 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 NCDNQ9UBB6 729 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 PCSK1NQ9UHG2 260 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 IP6K2Q9UHH9 426 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 SLCO3A1Q9UIG8 710 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 SLC25A13Q9UJS0 675 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 GMEB2Q9UKD1 530 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 INVSQ9Y283 1065 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 OR51B4Q9Y5P0 310 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 ABCA7Q8IZY2 2146 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 CKAP5Q14008 2032 aa14.39□□□□□ -0.11
LIMS1-201ENST00000332345 TARSL2A2RTX5 802 aaKnown RBP14.38□□□□□ -0.11
LIMS1-201ENST00000332345 EIF3CLB5ME19 914 aaKnown RBP14.38□□□□□ -0.11
LIMS1-201ENST00000332345 FAM72CH0Y354 149 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 DCLK1O15075 740 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 RNASEH1O60930 286 aaKnown RBP14.38□□□□□ -0.11
LIMS1-201ENST00000332345 ACADMP11310 421 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 HTR7P34969 479 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 PCK1P35558 622 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 ETFBP38117 255 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 CTSOP43234 321 aaPredicted RBP14.38□□□□□ -0.11
LIMS1-201ENST00000332345 LPAL2Q16609 132 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 HNRNPA1L2Q32P51 320 aaKnown RBP14.38□□□□□ -0.11
LIMS1-201ENST00000332345 ARTNQ5T4W7 220 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 FAM72AQ5TYM5 149 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 MANEALQ5VSG8 457 aa14.38□□□□□ -0.11
LIMS1-201ENST00000332345 FAM72DQ6L9T8 149 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms