RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 USP12O75317 370 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 ZDHHC11BP0C7U3 371 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 CSF2RAP15509 400 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 CCNCP24863 283 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 GJA8P48165 433 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 CASC4Q6P4E1 433 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 CPLX4Q7Z7G2 160 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 ATPAF2Q8N5M1 289 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 RTL3Q8N8U3 475 aaKnown RBP18.31■□□□□ 0.52
ACTB-201ENST00000331789 ATP6V0D2Q8N8Y2 350 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 OR52K1Q8NGK4 314 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 GSDMBQ8TAX9 411 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 ARNTL2Q8WYA1 636 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 TRIM43Q96BQ3 446 aaPredicted RBP18.31■□□□□ 0.52
ACTB-201ENST00000331789 TSGA13Q96PP4 275 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 PRDM5Q9NQX1 630 aaPredicted RBP18.31■□□□□ 0.52
ACTB-201ENST00000331789 SENP1Q9P0U3 644 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 IKBKGQ9Y6K9 419 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 ABHD14A-ACY1A0A1B0GW23 586 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 ARHGAP42A6NI28 874 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 PRPF4O43172 522 aaKnown RBP eCLIP18.31■□□□□ 0.522e-11■■■□□ 17.4
ACTB-201ENST00000331789 UGT1A9O60656 530 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 MAFKO60675 156 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 AP2A1O95782 977 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 INHBAP08476 426 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 KRT4P19013 534 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 WDR4P57081 412 aaKnown RBP18.31■□□□□ 0.52
ACTB-201ENST00000331789 AFMIDQ63HM1 303 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 KCTD11Q693B1 232 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 ITPRIPL1Q6GPH6 555 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 OTOP3Q7RTS5 596 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.31■□□□□ 0.52
ACTB-201ENST00000331789 LZTR1Q8N653 840 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 CNTD1Q8N815 330 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 DENND1AQ8TEH3 1009 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 CKAP2Q8WWK9 683 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 VAT1Q99536 393 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 KLF6Q99612 283 aaPredicted RBP18.31■□□□□ 0.52
ACTB-201ENST00000331789 UGT1A7Q9HAW7 530 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 UGT1A10Q9HAW8 530 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 UGT1A8Q9HAW9 530 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 TMEM51Q9NW97 253 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 SYBUQ9NX95 663 aa18.31■□□□□ 0.52
ACTB-201ENST00000331789 GOLGA8RI6L899 631 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 EBAG9O00559 213 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 CNTN5O94779 1100 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 TIMP1P01033 207 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 RPA3P35244 121 aaPredicted RBP18.3■□□□□ 0.52
ACTB-201ENST00000331789 ZNF33AQ06730 810 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 RAP1GAP2Q684P5 730 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 STEAP4Q687X5 459 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 FBXO46Q6PJ61 603 aaPredicted RBP18.3■□□□□ 0.52
ACTB-201ENST00000331789 SLC26A11Q86WA9 606 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 UNC5BQ8IZJ1 945 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 SLC39A11Q8N1S5 342 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 BTN2A3PQ96KV6 586 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 ZNF558Q96NG5 402 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 TTLL2Q9BWV7 592 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 UBE2OQ9C0C9 1292 aaKnown RBP18.3■□□□□ 0.52
ACTB-201ENST00000331789 NOL6Q9H6R4 1146 aaKnown RBP18.3■□□□□ 0.52
ACTB-201ENST00000331789 UBP1Q9NZI7 540 aa18.3■□□□□ 0.52
ACTB-201ENST00000331789 IQANK1A0A1B0GTG1 560 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 WASH4PA8MWX3 477 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 TYROBPO43914 113 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 TLR5O60602 858 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 SUN1O94901 812 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 IGLV3-27P01718 113 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 SOD2P04179 222 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 VIMP08670 466 aaKnown RBP18.29■□□□□ 0.52
ACTB-201ENST00000331789 ACRP10323 421 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 CCNB1P14635 433 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 TUFMP49411 452 aaKnown RBP18.29■□□□□ 0.52
ACTB-201ENST00000331789 PAPOLAP51003 745 aaKnown RBP18.29■□□□□ 0.52
ACTB-201ENST00000331789 ALFQ53S48 1182 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 TFAP2DQ7Z6R9 452 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 LRRC6Q86X45 466 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 IGSF8Q969P0 613 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 PAIP2Q9BPZ3 127 aaKnown RBP18.29■□□□□ 0.52
ACTB-201ENST00000331789 RC3H2Q9HBD1 1191 aaKnown RBP18.29■□□□□ 0.52
ACTB-201ENST00000331789 PRDM4Q9UKN5 801 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 SMG5Q9UPR3 1016 aaKnown RBP18.29■□□□□ 0.52
ACTB-201ENST00000331789 GOLGA6L7A0A1B0GV03 622 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 FAM159BA6NKW6 160 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 MT-ND3P03897 115 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 CSH1P0DML2 217 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 CSH2P0DML3 217 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 BTG3Q14201 252 aaPredicted RBP18.29■□□□□ 0.52
ACTB-201ENST00000331789 FBXL22Q6P050 247 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 OXNAD1Q96HP4 312 aaPredicted RBP18.29■□□□□ 0.52
ACTB-201ENST00000331789 ZNF419Q96HQ0 510 aaPredicted RBP18.29■□□□□ 0.52
ACTB-201ENST00000331789 SERAC1Q96JX3 654 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 APOL2Q9BQE5 337 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 MOCS1Q9NZB8 636 aa18.29■□□□□ 0.52
ACTB-201ENST00000331789 AFF4Q9UHB7 1163 aaKnown RBP18.29■□□□□ 0.52
ACTB-201ENST00000331789 TCP11X1B4DZS4 312 aa18.28■□□□□ 0.52
ACTB-201ENST00000331789 MATN3O15232 486 aa18.28■□□□□ 0.52
ACTB-201ENST00000331789 ABLIM3O94929 683 aa18.28■□□□□ 0.52
ACTB-201ENST00000331789 RHOQP17081 205 aa18.28■□□□□ 0.52
ACTB-201ENST00000331789 CA4P22748 312 aa18.28■□□□□ 0.52
ACTB-201ENST00000331789 WDR5P61964 334 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms