RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 PSMB4P28070 264 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 RAB33AQ14088 237 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 CYB5D1Q6P9G0 228 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 ZNF683Q8IZ20 524 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 PDCD7Q8N8D1 485 aaKnown RBP20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 HAUS2Q9NVX0 235 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 EURLQ9NYK6 297 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 KLHL8Q9P2G9 620 aaPredicted RBP20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 IGSF9Q9P2J2 1179 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 HSFX1Q9UBD0 423 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 TBK1Q9UHD2 729 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 VANGL2Q9ULK5 521 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 SLC12A4Q9UP95 1085 aa20.77■□□□□ 0.92
RIPPLY3-201ENST00000329553 FOXO6A8MYZ6 492 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 POC1B-GALNT4F8VUJ3 575 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 CDH16O75309 829 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 OAS1P00973 400 aaKnown RBP20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 GSTA1P08263 222 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 CREB1P16220 341 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 ARHGAP36Q6ZRI8 547 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 ATP6V0D2Q8N8Y2 350 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 DPF3Q92784 378 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 SGSM3Q96HU1 749 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 BTN2A3PQ96KV6 586 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZNF512Q96ME7 567 aaPredicted RBP20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 SLC39A8Q9C0K1 460 aa20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 LAMA2P24043 3122 aaKnown RBP20.77■□□□□ 0.91
RIPPLY3-201ENST00000329553 DFFAO00273 331 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 SNX3O60493 162 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 FGBP02675 491 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 MAGEA3P43357 314 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZBTB17Q13105 803 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 UBE2Q1Q7Z7E8 422 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 LZTR1Q8N653 840 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 RTL3Q8N8U3 475 aaKnown RBP20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZSCAN18Q8TBC5 510 aaPredicted RBP20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 FBF1Q8TES7 1133 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 LGALS13Q9UHV8 139 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 YIPF1Q9Y548 306 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZNF840PA6NDX5 716 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZBTB24O43167 697 aaPredicted RBP20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 MTSS1O43312 755 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZNF189O75820 626 aaPredicted RBP20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 GJB5O95377 273 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 PHBP35232 272 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 BADQ92934 168 aa20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 MRPL17Q9NRX2 175 aaKnown RBP20.76■□□□□ 0.91
RIPPLY3-201ENST00000329553 CARNS1A5YM72 827 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 PIAS1O75925 651 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 CSH1P0DML2 217 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 CSH2P0DML3 217 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 TSHRP16473 764 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 ALDH1A3P47895 512 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 LRRC14Q15048 493 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 TEX44Q53QW1 395 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 SNX30Q5VWJ9 437 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 TRPM8Q7Z2W7 1104 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 SIGLEC10Q96LC7 697 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 AGAP3Q96P47 875 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 PCDHB12Q9Y5F1 795 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 KIAA1671Q9BY89 1806 aa20.75■□□□□ 0.91
RIPPLY3-201ENST00000329553 WASH4PA8MWX3 477 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 CHUKO15111 745 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 JCHAINP01591 159 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 LINC00271P0C7V0 271 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 CD68P34810 354 aaPredicted RBP20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 PPM1AP35813 382 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 COG7P83436 770 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 CDK16Q00536 496 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 RING1Q06587 406 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 RAP1GAP2Q684P5 730 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 PARP9Q8IXQ6 854 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZNF276Q8N554 614 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 PDZD8Q8NEN9 1154 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 OVCA2Q8WZ82 227 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 MAML1Q92585 1016 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 MRRFQ96E11 262 aaKnown RBP20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 MYRFLQ96LU7 910 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 TSGA13Q96PP4 275 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 GORASP1Q9BQQ3 440 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 CXXC1Q9P0U4 656 aaPredicted RBP20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 LILRB3O75022 631 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 FGF18O76093 207 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 ATP2A2P16615 1042 aaKnown RBP20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 CCNCP24863 283 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 ATP5C1P36542 298 aaKnown RBP20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 KCNQ1P51787 676 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 HTRA4P83105 476 aaPredicted RBP20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZNF33AQ06730 810 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 PPIGQ13427 754 aaKnown RBP eCLIP20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 EFTUD2Q15029 972 aaKnown RBP eCLIP20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 AFMIDQ63HM1 303 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 FBXL22Q6P050 247 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 TDRPQ86YL5 185 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 MPP5Q8N3R9 675 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 DYDC1Q8WWB3 177 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 ACSS3Q9H6R3 686 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 XAB2Q9HCS7 855 aaKnown RBP20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 EIF2B3Q9NR50 452 aaKnown RBP20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 DNMT3LQ9UJW3 386 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms