RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 CARNMT1Q8N4J0 409 aa16.74■□□□□ 0.27
SMAD3-201ENST00000327367 POMGNT2Q8NAT1 580 aa16.74■□□□□ 0.27
SMAD3-201ENST00000327367 DLG3Q92796 817 aa16.74■□□□□ 0.27
SMAD3-201ENST00000327367 PNPLA7Q6ZV29 1317 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 POLR1AO95602 1720 aaPredicted RBP16.73■□□□□ 0.27
SMAD3-201ENST00000327367 C15orf38-AP3S2A0A0A6YYH1 394 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 PSMD12O00232 456 aaPredicted RBP16.73■□□□□ 0.27
SMAD3-201ENST00000327367 PRRG1O14668 218 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 HLA-DQA2P01906 255 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 CDH18Q13634 790 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 FRG1Q14331 258 aaKnown RBP16.73■□□□□ 0.27
SMAD3-201ENST00000327367 C6orf183Q5T699 404 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 ULK3Q6PHR2 472 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 RNF44Q7L0R7 432 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 ARPINQ7Z6K5 226 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 VPS35Q96QK1 796 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 CNPY3Q9BT09 278 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 PRELID1Q9Y255 219 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 SF3B1O75533 1304 aaKnown RBP eCLIP16.73■□□□□ 0.273e-6■■■■■ 109.5
SMAD3-201ENST00000327367 FAM92AA1XBS5 289 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 C2CD2LO14523 706 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 RPA1P27694 616 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 STAT5AP42229 794 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 CRATP43155 626 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 RPL14P50914 215 aaKnown RBP16.73■□□□□ 0.27
SMAD3-201ENST00000327367 SNX17Q15036 470 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 METTL6Q8TCB7 284 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 FAM129BQ96TA1 746 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 RHOBTB2Q9BYZ6 727 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 RSPH9Q9H1X1 276 aaPredicted RBP16.73■□□□□ 0.27
SMAD3-201ENST00000327367 NMRAL1Q9HBL8 299 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 SLCO1B3Q9NPD5 702 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 C12orf4Q9NQ89 552 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 PFDN2Q9UHV9 154 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 IGSF9BQ9UPX0 1349 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 COPZ1P61923 177 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 HPS6Q86YV9 775 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 MNTQ99583 582 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 CPNE1Q99829 537 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 CRYL1Q9Y2S2 319 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
SMAD3-201ENST00000327367 CALCAP01258 141 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 ANXA6P08133 673 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 ZNF470Q6ECI4 717 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 LSM14AQ8ND56 463 aaKnown RBP16.73■□□□□ 0.27
SMAD3-201ENST00000327367 LRRN4Q8WUT4 740 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 SLC4A9Q96Q91 983 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 BHLHE41Q9C0J9 482 aaPredicted RBP16.73■□□□□ 0.27
SMAD3-201ENST00000327367 SP140LQ9H930 580 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 SLC25A13Q9UJS0 675 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 TMEM114B3SHH9 223 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 MSH3P20585 1137 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 OR1G1P47890 313 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 TIMM50Q3ZCQ8 353 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 DGCR14Q96DF8 476 aaKnown RBP16.73■□□□□ 0.27
SMAD3-201ENST00000327367 SLC25A23Q9BV35 468 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 MECRQ9BV79 373 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 FBXO28Q9NVF7 368 aa16.73■□□□□ 0.27
SMAD3-201ENST00000327367 A0A1W2PQ72 361 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 VAPBO95292 243 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 C9P02748 559 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 NTRK1P04629 796 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 PGAM1P18669 254 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 SCIMPQ6UWF3 145 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 SATL1Q86VE3 508 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 TRIM48Q8IWZ4 208 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 NAT14Q8WUY8 206 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 MYLPFQ96A32 169 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 DNAJC18Q9H819 358 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 STOML2Q9UJZ1 356 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 BAIAP2Q9UQB8 552 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 LYPLA1O75608 230 aaPredicted RBP16.72■□□□□ 0.27
SMAD3-201ENST00000327367 CD4P01730 458 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 GP5P40197 560 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 PSME3P61289 254 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 FAM117BQ6P1L5 589 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 SPATA6LQ8N4H0 392 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 FAM47BQ8NA70 645 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 TAS1R2Q8TE23 839 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 PIGKQ92643 395 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 HGH1Q9BTY7 390 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 CD3EAPO15446 510 aaKnown RBP16.72■□□□□ 0.27
SMAD3-201ENST00000327367 CST1P01037 141 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 UQCRBP14927 111 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 PPP2R1BP30154 601 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 CHKAP35790 457 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 LIN54Q6MZP7 749 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 BHLHB9Q6PI77 547 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 GCNT7Q6ZNI0 430 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 GALNT5Q7Z7M9 940 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 CCDC185Q8N715 623 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 NSUN4Q96CB9 384 aaKnown RBP16.72■□□□□ 0.27
SMAD3-201ENST00000327367 PGM2Q96G03 612 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 CPB2Q96IY4 423 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 CDHR5Q9HBB8 845 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 CLN6Q9NWW5 311 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 UCKL1Q9NWZ5 548 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 NPR3P17342 541 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 OXCT1P55809 520 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 AUHQ13825 339 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms