RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 FAM133BQ5BKY9 247 aaKnown RBP19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 MANEALQ5VSG8 457 aa19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 Q6ZNB5 142 aa19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 ARID3BQ8IVW6 561 aaPredicted RBP19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 ZSCAN18Q8TBC5 510 aaPredicted RBP19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 C1orf74Q96LT6 269 aa19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 EPAS1Q99814 870 aa19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 PRMT1Q99873 361 aaKnown RBP19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 TDP1Q9NUW8 608 aa19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 TPX2Q9ULW0 747 aaKnown RBP19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 GOLGA6L10A6NI86 522 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 SLC6A4P31645 630 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 TPI1P60174 286 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 GPS1Q13098 491 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 DPYSQ14117 519 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 MORF4L2Q15014 288 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 CEP85LQ5SZL2 805 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 DENND2CQ68D51 928 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 RFX8Q6ZV50 586 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 CHSY1Q86X52 802 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 RELL1Q8IUW5 271 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 ZNF683Q8IZ20 524 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 SMRP1Q8NCR6 262 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 AZIN2Q96A70 460 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 MYEOVQ96EZ4 313 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 RIPOR3Q96MK2 946 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 ARHGEF4Q9NR80 690 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 ADAM21Q9UKJ8 722 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 VANGL2Q9ULK5 521 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 GOLGA6CA6NDK9 693 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 E9PAM4 449 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 H3BQ06 376 aaPredicted RBP19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 ZSCAN5DPP0CG00 497 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 GOLGA6DP0CG33 693 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 ETS1P14921 441 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 FOSL2P15408 326 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 TACR2P21452 398 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 AMPD1P23109 780 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 NR2C2P49116 596 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 NRG1Q02297 640 aaPredicted RBP19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 ZNF844Q08AG5 666 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 NPNTQ6UXI9 565 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 PRUNE1Q86TP1 453 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 ZCCHC9Q8N567 271 aaKnown RBP19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 SEMA4AQ9H3S1 761 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 TMBIM4Q9HC24 238 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 ETNK2Q9NVF9 386 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 GOLGA6AQ9NYA3 693 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 SH3BP1Q9Y3L3 701 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 MFHAS1Q9Y4C4 1052 aa19.28■□□□□ 0.68
EXOSC3-201ENST00000327304 NUP210Q8TEM1 1887 aaPredicted RBP19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 EYSQ5T1H1 3165 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 C5orf42Q9H799 3197 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 CFAP69A5D8W1 941 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 RIPK2O43353 540 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 IFNB1P01574 187 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 MTHFRP42898 656 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 IRAK1P51617 712 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 MTA1Q13330 715 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 TERF2Q15554 542 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 TTMPQ5BVD1 217 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 FAM78AQ5JUQ0 283 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 FBXL22Q6P050 247 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 RFWD3Q6PCD5 774 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 HTR3DQ70Z44 454 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 CROCCP2Q86T23 111 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 ARL8AQ96BM9 186 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 POMKQ9H5K3 350 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 CD207Q9UJ71 328 aa19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 LSM7Q9UK45 103 aaKnown RBP19.27■□□□□ 0.68
EXOSC3-201ENST00000327304 DENND4AQ7Z401 1863 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 SMAPO00193 183 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 TRDMT1O14717 391 aaKnown RBP19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 MYZAPP0CAP1 466 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 EPHB2P29323 1055 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 CHKAP35790 457 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 HCAR3P49019 387 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 ZNF135P52742 658 aaPredicted RBP19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 GDF10P55107 478 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 USP4Q13107 963 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 XRCC4Q13426 336 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 ZNF77Q15935 545 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 ADGRF1Q5T601 910 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 RWDD4Q6NW29 188 aaKnown RBP19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 DARS2Q6PI48 645 aaKnown RBP19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 C1orf228Q6PIY5 440 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 CCDC25Q86WR0 208 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 BBS7Q8IWZ6 715 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 PPM1EQ8WY54 764 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 IGSF8Q969P0 613 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 EXOC4Q96A65 974 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 TBC1D31Q96DN5 1066 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 RSPRY1Q96DX4 576 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 ASB16Q96NS5 453 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 MYADMQ96S97 322 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 GDE1Q9NZC3 331 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 STOML2Q9UJZ1 356 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 CDH7Q9ULB5 785 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 SHOC2Q9UQ13 582 aa19.26■□□□□ 0.67
EXOSC3-201ENST00000327304 USP15Q9Y4E8 981 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms