RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 KCNE1P15382 129 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 LMO2P25791 158 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 HCAR3P49019 387 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 NUMBP49757 651 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 HK2P52789 917 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 SLC25A3Q00325 362 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 EPGNQ6UW88 154 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 CLEC14AQ86T13 490 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 APPL2Q8NEU8 664 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 NTAN1Q96AB6 310 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 APBA2Q99767 749 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 EIF2AQ9BY44 585 aaKnown RBP20.33■□□□□ 0.84
SOX2-201ENST00000325404 SETD4Q9NVD3 440 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 MID2Q9UJV3 735 aa20.33■□□□□ 0.84
SOX2-201ENST00000325404 TNPO2O14787 897 aaKnown RBP20.32■□□□□ 0.84
SOX2-201ENST00000325404 F2P00734 622 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 WARSP23381 471 aaKnown RBP20.32■□□□□ 0.84
SOX2-201ENST00000325404 HADHAP40939 763 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 CDC16Q13042 620 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 INTS6LQ5JSJ4 861 aaKnown RBP20.32■□□□□ 0.84
SOX2-201ENST00000325404 NAIF1Q69YI7 327 aaPredicted RBP20.32■□□□□ 0.84
SOX2-201ENST00000325404 DHDDSQ86SQ9 333 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 PIGZQ86VD9 579 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 GSTCDQ8NEC7 633 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 ZFAND2BQ8WV99 257 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 TTC1Q99614 292 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 CASS4Q9NQ75 786 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 IL1RAPL1Q9NZN1 696 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 BFARQ9NZS9 450 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 NR2E3Q9Y5X4 410 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 TLL2Q9Y6L7 1015 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 ARHGAP42A6NI28 874 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 MTSS1O43312 755 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 GPR32O75388 356 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 RECQL4O94761 1208 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 LYNP07948 512 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 ERVK-10P10266 1014 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 PIM1P11309 404 aaPredicted RBP20.32■□□□□ 0.84
SOX2-201ENST00000325404 ARRB2P32121 409 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 TAF6P49848 677 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 CSE1LP55060 971 aaKnown RBP20.32■□□□□ 0.84
SOX2-201ENST00000325404 KIZQ2M2Z5 673 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 SV2CQ496J9 727 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 PPM1JQ5JR12 505 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 ATG14Q6ZNE5 492 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 DCLK2Q8N568 766 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.32■□□□□ 0.84
SOX2-201ENST00000325404 CDH19Q9H159 772 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 CDH22Q9UJ99 828 aa20.32■□□□□ 0.84
SOX2-201ENST00000325404 BAG2O95816 211 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 CYP2C9P11712 490 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 PEX19P40855 299 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 SCAPQ12770 1279 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 CRHR2Q13324 411 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 DCAF6Q58WW2 860 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 SLC30A9Q6PML9 568 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 TOP6BLQ8N6T0 577 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 CCNYQ8ND76 341 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 SLC7A14Q8TBB6 771 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 WNT8BQ93098 351 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 LENG1Q96BZ8 264 aaPredicted RBP20.31■□□□□ 0.84
SOX2-201ENST00000325404 FCRL3Q96P31 734 aaPredicted RBP20.31■□□□□ 0.84
SOX2-201ENST00000325404 MEI4A8MW99 385 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 FAM155AB1AL88 458 aaPredicted RBP20.31■□□□□ 0.84
SOX2-201ENST00000325404 EEF2KO00418 725 aaKnown RBP20.31■□□□□ 0.84
SOX2-201ENST00000325404 HCRTO43612 131 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 APOA4P06727 396 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 MLH1P40692 756 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 PRKAA2P54646 552 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 ITGA9Q13797 1035 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 PID1Q7Z2X4 250 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 LCA5Q86VQ0 697 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 ARHGAP18Q8N392 663 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 NME8Q8N427 588 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 LBHD1Q9BQE6 289 aaPredicted RBP20.31■□□□□ 0.84
SOX2-201ENST00000325404 RTKNQ9BST9 563 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 GJD2Q9UKL4 321 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 SSX2IPQ9Y2D8 614 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 NRCAMQ92823 1304 aa20.31■□□□□ 0.84
SOX2-201ENST00000325404 SMIM28A0A1B0GU29 152 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 AP3B1O00203 1094 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 SPTLC1O15269 473 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 TIMM44O43615 452 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 SMIM10L2AP0DMW4 78 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 SMIM10L2BP0DMW5 78 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 NPY2RP49146 381 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 ZNF135P52742 658 aaPredicted RBP20.3■□□□□ 0.84
SOX2-201ENST00000325404 ADIGQ0VDE8 80 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 PDSS2Q86YH6 399 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 B3GALNT2Q8NCR0 500 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 RDH11Q8TC12 318 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 FAM149B1Q96BN6 582 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 MCMBPQ9BTE3 642 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 TRHDEQ9UKU6 1024 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 VANGL2Q9ULK5 521 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 ARHGAP26Q9UNA1 814 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 PDCD11Q14690 1871 aaKnown RBP20.3■□□□□ 0.84
SOX2-201ENST00000325404 SLC22A2O15244 555 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 DNAJB1P25685 340 aa20.3■□□□□ 0.84
SOX2-201ENST00000325404 DNAJB2P25686 324 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms