RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CCNFP41002 786 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 FLOT2Q14254 428 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 CNGA3Q16281 694 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 PCSK7Q16549 785 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 SH3D19Q5HYK7 790 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 PRAMEF19Q5SWL8 479 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 WSCD1Q658N2 575 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 LENG1Q96BZ8 264 aaPredicted RBP13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 NMD3Q96D46 503 aaKnown RBP13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 ZNF560Q96MR9 790 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 OR52B2Q96RD2 323 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 KLHL4Q9C0H6 718 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 NMRAL1Q9HBL8 299 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 MORF4L1Q9UBU8 362 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 EMCNQ9ULC0 261 aa13.18□□□□□ -0.3
HMGCS1-201ENST00000325110 A0A088AWK7 358 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 CLGNO14967 610 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 ZBTB24O43167 697 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 ADCY6O43306 1168 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 PMPCBO75439 489 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 PIGNO95427 931 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 GSTA2P09210 222 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 USP17L7P0C7H9 530 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 TKTP29401 623 aaKnown RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 GRM5P41594 1212 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 ACADSBP45954 432 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 GRIK3Q13003 919 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 KYAT1Q16773 422 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 LRRC8BQ6P9F7 803 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 IYDQ6PHW0 289 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 SLC16A10Q8TF71 515 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 CDCA5Q96FF9 252 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 ZFP42Q96MM3 310 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 ILKAPQ9H0C8 392 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 MTMR10Q9NXD2 777 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 PDP2Q9P2J9 529 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 APPL1Q9UKG1 709 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 RUVBL2Q9Y230 463 aaKnown RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 DTNAQ9Y4J8 743 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 F8W8V4 182 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 TRIM13O60858 407 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 SNNO75324 88 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 SOX11P35716 441 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 PLK1P53350 603 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 LBRQ14739 615 aaKnown RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 ACAD11Q709F0 780 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 MARK2Q7KZI7 788 aaKnown RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 SNX31Q8N9S9 440 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 FAM156AQ8NDB6 213 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 PPP2R3CQ969Q6 453 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 CNBD2Q96M20 576 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 FCRL3Q96P31 734 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 KCNK16Q96T55 309 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 MOCS1Q9NZB8 636 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 NUDT5Q9UKK9 219 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 POMPQ9Y244 141 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 NME7Q9Y5B8 376 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 FAM72CH0Y354 149 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 DPYSL4O14531 572 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 SPTLC1O15269 473 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 BEST1O76090 585 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 PTPN9P43378 593 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 SATB1Q01826 763 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 CACNB2Q08289 660 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 CTBP1Q13363 440 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 DCAF4L1Q3SXM0 396 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 SFT2D3Q587I9 215 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 FAM72AQ5TYM5 149 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 FAM72DQ6L9T8 149 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 FAM72BQ86X60 149 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 RYBPQ8N488 228 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 B3GALNT2Q8NCR0 500 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 NLGN2Q8NFZ4 835 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 ZSCAN18Q8TBC5 510 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 KCTD4Q8WVF5 259 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 PIGVQ9NUD9 493 aa13.17□□□□□ -0.3
HMGCS1-201ENST00000325110 MCM3APO60318 1980 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 XPOTO43592 962 aaKnown RBP13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 KLF10Q13118 480 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 HASPINQ8TF76 798 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 APBB2Q92870 758 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 FAM136AQ96C01 138 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 RTP4Q96DX8 246 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 VPS39Q96JC1 886 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 CPNE1Q99829 537 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 NAT9Q9BTE0 207 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 COPS7BQ9H9Q2 264 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 CHST12Q9NRB3 414 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 RNASEH1O60930 286 aaKnown RBP13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 C1QAP02745 245 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 CTSHP09668 335 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 GSTT1P30711 240 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 DLG1Q12959 904 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 SLC25A52Q3SY17 297 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 SEL1L3Q68CR1 1132 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 ZDHHC17Q8IUH5 632 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 SLC10A4Q96EP9 437 aa13.16□□□□□ -0.3
HMGCS1-201ENST00000325110 GATA5Q9BWX5 397 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms