RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 TPP1O14773 563 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 TIMM44O43615 452 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 GAP43P17677 238 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 GALCP54803 685 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 STIM1Q13586 685 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 ANO4Q32M45 955 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 KMT5BQ4FZB7 885 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 TMPRSS9Q7Z410 1059 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 MTERF4Q7Z6M4 381 aaKnown RBP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 METTL23Q86XA0 190 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 VSTM4Q8IW00 320 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 IL22RA1Q8N6P7 574 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 SPRTNQ9H040 489 aaPredicted RBP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 PABPC3Q9H361 631 aaKnown RBP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 CGNQ9P2M7 1197 aaKnown RBP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 FBXO10Q9UK96 956 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 ODF2LQ9ULJ1 636 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 D6RAR5 112 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 EIF3DO15371 548 aaKnown RBP eCLIP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 NKX2-8O15522 239 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 DUX1O43812 170 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 DPM1O60762 260 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 RNGTTO60942 597 aaKnown RBP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 TXKP42681 527 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 PAK1Q13153 545 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 ALCAMQ13740 583 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 TRIM14Q14142 442 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 ZCWPW2Q504Y3 356 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 FIGNQ5HY92 759 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 PAPD7Q5XG87 772 aaKnown RBP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 ZNF776Q68DI1 518 aaPredicted RBP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 TTI2Q6NXR4 508 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 CLEC9AQ6UXN8 241 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 APLFQ8IW19 511 aaPredicted RBP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 RNF214Q8ND24 703 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 SNX29Q8TEQ0 813 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 TRIM44Q96DX7 344 aaPredicted RBP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 TCHPQ9BT92 498 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 STRA6Q9BX79 667 aa6.93□□□□□ -1.3
CSTF3-201ENST00000323959 PCDHGA9Q9Y5G4 932 aaKnown RBP6.93□□□□□ -1.3
CSTF3-201ENST00000323959 CPED1A4D0V7 1026 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 WASH3PC4AMC7 463 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 HAX1O00165 279 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 FGFR1OPO95684 399 aaKnown RBP6.92□□□□□ -1.3
CSTF3-201ENST00000323959 CD44P16070 742 aaKnown RBP6.92□□□□□ -1.3
CSTF3-201ENST00000323959 RECQLP46063 649 aaPredicted RBP6.92□□□□□ -1.3
CSTF3-201ENST00000323959 FANCCQ00597 558 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 RUNX1T1Q06455 604 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 EDRF1Q3B7T1 1238 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 EEF1DP3Q658K8 133 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 RD3Q7Z3Z2 195 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 CACNA2D3Q8IZS8 1091 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 ST6GALNAC3Q8NDV1 305 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 CCDC112Q8NEF3 446 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 DNAJB8Q8NHS0 232 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 CEP63Q96MT8 703 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 ZMAT2Q96NC0 199 aaKnown RBP6.92□□□□□ -1.3
CSTF3-201ENST00000323959 TARS2Q9BW92 718 aaKnown RBP6.92□□□□□ -1.3
CSTF3-201ENST00000323959 CCDC113Q9H0I3 377 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 UCKL1Q9NWZ5 548 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 ABI2Q9NYB9 513 aaPredicted RBP6.92□□□□□ -1.3
CSTF3-201ENST00000323959 AKAP7Q9P0M2 348 aaPredicted RBP6.92□□□□□ -1.3
CSTF3-201ENST00000323959 ZNF451Q9Y4E5 1061 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 TIMM13Q9Y5L4 95 aaPredicted RBP6.92□□□□□ -1.3
CSTF3-201ENST00000323959 DGAT1O75907 488 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 ITGB3P05106 788 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 PRKCHP24723 683 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 CATSPER3Q86XQ3 398 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 PNPLA2Q96AD5 504 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 GFM1Q96RP9 751 aaKnown RBP6.92□□□□□ -1.3
CSTF3-201ENST00000323959 SPOCK3Q9BQ16 436 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 EBF2Q9HAK2 575 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 ANKEF1Q9NU02 776 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 TMLHEQ9NVH6 421 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 TLK1Q9UKI8 766 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 SH3BP1Q9Y3L3 701 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 PCDHGB6Q9Y5F9 930 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 MYOFQ9NZM1 2061 aa6.92□□□□□ -1.3
CSTF3-201ENST00000323959 SFI1A8K8P3 1242 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 PSMA7O14818 248 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 MAPK13O15264 365 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 LATO43561 262 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 RAD1O60671 282 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 MED24O75448 989 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 GNA14O95837 355 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 CYP11B2P19099 503 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 MAP4P27816 1152 aaKnown RBP6.91□□□□□ -1.3
CSTF3-201ENST00000323959 HTR1EP28566 365 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 PPP2R3AQ06190 1150 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 NADK2Q4G0N4 442 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 PRPF39Q86UA1 669 aaKnown RBP6.91□□□□□ -1.3
CSTF3-201ENST00000323959 TMEM25Q86YD3 366 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 Q8NA96 180 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 RBBP8NLQ8NC74 664 aaPredicted RBP6.91□□□□□ -1.3
CSTF3-201ENST00000323959 C18orf25Q96B23 403 aaPredicted RBP6.91□□□□□ -1.3
CSTF3-201ENST00000323959 CDK5RAP3Q96JB5 506 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 SPATA17Q96L03 361 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 CMKLR1Q99788 373 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 TTLL2Q9BWV7 592 aa6.91□□□□□ -1.3
CSTF3-201ENST00000323959 NAA15Q9BXJ9 866 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms