RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 PCDHGA4Q9Y5G9 962 aa12.85□□□□□ -0.35
FN1-201ENST00000323926 KCNH1O95259 989 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 SLC2A4P14672 509 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 RTP1P59025 263 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 ADAMTSL2Q86TH1 951 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 IFNEQ86WN2 208 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 ZCCHC9Q8N567 271 aaKnown RBP12.84□□□□□ -0.35
FN1-201ENST00000323926 CSGALNACT1Q8TDX6 532 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 HAVCR1Q96D42 359 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 ASXL3Q9C0F0 2248 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 NPHP3-ACAD11A0A0J9YXS1 232 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 PP2D1A8MPX8 630 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 ITGAVP06756 1048 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 AKR1A1P14550 325 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 SLC1A6P48664 564 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 DRG2P55039 364 aaKnown RBP12.84□□□□□ -0.35
FN1-201ENST00000323926 RAB25P57735 213 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 POLNQ7Z5Q5 900 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 STAG3L4Q8TBR4 150 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 USP7Q93009 1102 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 FAM111AQ96PZ2 611 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 ATP13A3Q9H7F0 1226 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 IRAK3Q9Y616 596 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 RGPD2P0DJD1 1756 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 H0YC42 278 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 ACKR2O00590 384 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 AREL1O15033 823 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 GMFBP60983 142 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 PAFAH2Q99487 392 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 ST3GAL5Q9UNP4 418 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 MYL12BO14950 172 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 ACTR3P61158 418 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 FAM46CQ5VWP2 391 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 CES5AQ6NT32 575 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 TTI2Q6NXR4 508 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 HHATLQ9HCP6 504 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 GALNT8Q9NY28 637 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 DERAQ9Y315 318 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 TAF6LQ9Y6J9 622 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 SHPRHQ149N8 1683 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 RPTORQ8N122 1335 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 SEMA3DO95025 777 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 NFICP08651 508 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 NPR3P17342 541 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 ITGAXP20702 1163 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 NEK3P51956 506 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 BBS4Q96RK4 519 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 HEY2Q9UBP5 337 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 POLR2EP19388 210 aaKnown RBP12.84□□□□□ -0.35
FN1-201ENST00000323926 HTR3CQ8WXA8 447 aa12.84□□□□□ -0.35
FN1-201ENST00000323926 TRAV19A0A0A6YYK7 116 aa12.83□□□□□ -0.35
FN1-201ENST00000323926 ALADP13716 330 aa12.83□□□□□ -0.35
FN1-201ENST00000323926 FGFR2P21802 821 aa12.83□□□□□ -0.35
FN1-201ENST00000323926 PSMD4P55036 377 aaKnown RBP12.83□□□□□ -0.35
FN1-201ENST00000323926 CYB5D1Q6P9G0 228 aa12.83□□□□□ -0.35
FN1-201ENST00000323926 GLT6D1Q7Z4J2 308 aa12.83□□□□□ -0.35
FN1-201ENST00000323926 PTCD3Q96EY7 689 aaKnown RBP12.83□□□□□ -0.35
FN1-201ENST00000323926 CORO1CQ9ULV4 474 aaPredicted RBP12.83□□□□□ -0.35
FN1-201ENST00000323926 SCTRP47872 440 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 LSM12Q3MHD2 195 aaKnown RBP12.83□□□□□ -0.36
FN1-201ENST00000323926 SGO1Q5FBB7 561 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 TMBIM4Q9HC24 238 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 NOD2Q9HC29 1040 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 CRNNQ9UBG3 495 aaPredicted RBP12.83□□□□□ -0.36
FN1-201ENST00000323926 MYRFQ9Y2G1 1151 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 RPS7P62081 194 aaKnown RBP12.83□□□□□ -0.36
FN1-201ENST00000323926 SLC25A41Q8N5S1 370 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 AMER2Q8N7J2 671 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 FBXO36Q8NEA4 188 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 RASSF5Q8WWW0 418 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 DPY30Q9C005 99 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 REEP1Q9H902 201 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 POPDC2Q9HBU9 364 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 ACO1P21399 889 aaKnown RBP12.83□□□□□ -0.36
FN1-201ENST00000323926 SARSP49591 514 aaKnown RBP12.83□□□□□ -0.36
FN1-201ENST00000323926 GALNT4Q8N4A0 578 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 PSMA8Q8TAA3 256 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 PPP1R36Q96LQ0 422 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 OPTCQ9UBM4 332 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 NR2E3Q9Y5X4 410 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 XIAPP98170 497 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 OTUD4Q01804 1114 aaKnown RBP12.83□□□□□ -0.36
FN1-201ENST00000323926 PPATQ06203 517 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 LIN54Q6MZP7 749 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 GPSM1Q86YR5 675 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 MRPL57Q9BQC6 102 aaKnown RBP12.83□□□□□ -0.36
FN1-201ENST00000323926 TRIM51Q9BSJ1 452 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 SYNDIG1LA6NDD5 238 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 ZBTB39O15060 712 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 VAV1P15498 845 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 NOS2P35228 1153 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 FMR1Q06787 632 aaKnown RBP eCLIP12.83□□□□□ -0.36
FN1-201ENST00000323926 BNIP2Q12982 314 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 CCDC28BQ9BUN5 200 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 ZNF185O15231 689 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 CATP04040 527 aaKnown RBP12.83□□□□□ -0.36
FN1-201ENST00000323926 TRAF2Q12933 501 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 GIT2Q14161 759 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 MAPK11Q15759 364 aa12.83□□□□□ -0.36
FN1-201ENST00000323926 MYDGFQ969H8 173 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms