RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 RNF168Q8IYW5 571 aaPredicted RBP18.27■□□□□ 0.52
PRKCB-202ENST00000321728 MAGEB5Q9BZ81 275 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 COQ10BQ9H8M1 238 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 MORF4L1Q9UBU8 362 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 SIX4Q9UIU6 781 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 VPS28Q9UK41 221 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 PCDHGA4Q9Y5G9 962 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 C7orf72A4D263 438 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 TMEM114B3SHH9 223 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 G3V2L1 256 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 H6PDO95479 791 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 ZNF26P17031 533 aaPredicted RBP18.26■□□□□ 0.51
PRKCB-202ENST00000321728 FGFR3P22607 806 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 PPARGP37231 505 aaPredicted RBP18.26■□□□□ 0.51
PRKCB-202ENST00000321728 ABCG1P45844 678 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 IRF9Q00978 393 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 TMEM62Q0P6H9 643 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 LRRC43Q8N309 656 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 ARNTL2Q8WYA1 636 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 ATP6V1E2Q96A05 226 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 PGLYRP2Q96PD5 576 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 WRNIP1Q96S55 665 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 GATA5Q9BWX5 397 aaPredicted RBP18.26■□□□□ 0.51
PRKCB-202ENST00000321728 CEP41Q9BYV8 373 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 EFCAB1Q9HAE3 211 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 SYBUQ9NX95 663 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 SIP14410 1827 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.26■□□□□ 0.51
PRKCB-202ENST00000321728 LTFP02788 710 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 CXCL8P10145 99 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 MLNP12872 115 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 MAGEA10P43363 369 aaPredicted RBP18.26■□□□□ 0.51
PRKCB-202ENST00000321728 NAB1Q13506 487 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 C16orf72Q14CZ0 275 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 BBS5Q8N3I7 341 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 COLGALT1Q8NBJ5 622 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 RNF149Q8NC42 400 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 HTR3CQ8WXA8 447 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 QKIQ96PU8 341 aaKnown RBP eCLIP18.26■□□□□ 0.515e-7■■■■■ 44.9
PRKCB-202ENST00000321728 TBCBQ99426 244 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 GMLQ99445 158 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 TMEM79Q9BSE2 394 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 CAB39LQ9H9S4 337 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 ADA2Q9NZK5 511 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 MYRFQ9Y2G1 1151 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 A0A096LPK6 155 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 MATN2O00339 956 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 HDAC3O15379 428 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 ITGB3P05106 788 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 VDRP11473 427 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 CCR10P46092 362 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 DLG2Q15700 870 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 SETD3Q86TU7 594 aaPredicted RBP18.26■□□□□ 0.51
PRKCB-202ENST00000321728 NPAS2Q99743 824 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 C20orf96Q9NUD7 363 aaPredicted RBP18.26■□□□□ 0.51
PRKCB-202ENST00000321728 TSPAN16Q9UKR8 245 aa18.26■□□□□ 0.51
PRKCB-202ENST00000321728 POLBP06746 335 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 FAM163BP0C2L3 166 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 GTF2A2P52657 109 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 SLC44A4Q53GD3 710 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 GRTP1Q5TC63 336 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 STRA8Q7Z7C7 330 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 CROCCP3Q8IVE0 287 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 NETO2Q8NC67 525 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 CERS2Q96G23 380 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 AGAP3Q96P47 875 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 LGMNQ99538 433 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 CPNE1Q99829 537 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 NIFKQ9BYG3 293 aaKnown RBP18.25■□□□□ 0.51
PRKCB-202ENST00000321728 TRPV6Q9H1D0 765 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 A0A0A0MRY4 1105 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 B4GALT4O60513 344 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 ENTPD1P49961 510 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 PTK2BQ14289 1009 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 MAP1SQ66K74 1059 aaPredicted RBP18.25■□□□□ 0.51
PRKCB-202ENST00000321728 EEPD1Q7L9B9 569 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 PATL1Q86TB9 770 aaKnown RBP18.25■□□□□ 0.51
PRKCB-202ENST00000321728 ZBTB8OSQ8IWT0 167 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 SCUBE3Q8IX30 993 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 TMEM192Q8IY95 271 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 MYO1HQ8N1T3 1032 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 C1orf127Q8N9H9 656 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 ZBTB8BQ8NAP8 495 aaPredicted RBP18.25■□□□□ 0.51
PRKCB-202ENST00000321728 SMYD1Q8NB12 490 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 SPATA13Q96N96 652 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 PLGRKTQ9HBL7 147 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 NMRAL1Q9HBL8 299 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 ANLNQ9NQW6 1124 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 MFHAS1Q9Y4C4 1052 aa18.25■□□□□ 0.51
PRKCB-202ENST00000321728 BRWD3Q6RI45 1802 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 BOLA2-SMG1P6H3BVE0 249 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 ACOT8O14734 319 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 MDM4O15151 490 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 VAPBO95292 243 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 NFICP08651 508 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 CYP3A5P20815 502 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 SPRP35270 261 aaPredicted RBP18.24■□□□□ 0.51
PRKCB-202ENST00000321728 RPL14P50914 215 aaKnown RBP18.24■□□□□ 0.51
PRKCB-202ENST00000321728 NDST2P52849 883 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 PLOD1Q02809 727 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms