RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 HDCP19113 662 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 CDK9P50750 372 aaKnown RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 ZNF143P52747 638 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 PTK2BQ14289 1009 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 FAM219BQ5XKK7 198 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 OGFOD2Q6N063 350 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 FAM183BPQ6ZVS7 135 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 SPNS2Q8IVW8 549 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 ZNF786Q8N393 782 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 BBS5Q8N3I7 341 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 APBB2Q92870 758 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 RMND5BQ96G75 393 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 AGAP3Q96P47 875 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 AGAP2Q99490 1192 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 LGMNQ99538 433 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 CNPY3Q9BT09 278 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 FAIMQ9NVQ4 179 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 TRIM43BA6NCK2 446 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 TMEM233B4DJY2 109 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 TK2O00142 265 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 MED7O43513 233 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 RGS20O76081 388 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 VAPBO95292 243 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 CYP2F1P24903 491 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 CAPSQ13938 189 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 HEATR6Q6AI08 1181 aaKnown RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 ZFP1Q6P2D0 407 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 ELMSAN1Q6PJG2 1045 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 TIFABQ6ZNK6 161 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 WDR49Q8IV35 697 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 CHERPQ8IWX8 916 aaKnown RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 TMEM192Q8IY95 271 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 TMEM102Q8N9M5 508 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 SLC4A11Q8NBS3 891 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 LRRC39Q96DD0 335 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 MAML3Q96JK9 1138 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 GATA5Q9BWX5 397 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 FRMD8Q9BZ67 464 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 XYLT2Q9H1B5 865 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 NOL11Q9H8H0 719 aaKnown RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 RRAGCQ9HB90 399 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 SYBUQ9NX95 663 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 PRPF19Q9UMS4 504 aaKnown RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 MYRFQ9Y2G1 1151 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 LOXHD1Q8IVV2 1947 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 ADGRA2Q96PE1 1338 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 PRSS51A0A1B0GVH4 220 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 SH3PXD2BA1X283 911 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 CLIC3O95833 236 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 GNAO1P09471 354 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 KCNA2P16389 499 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 PTPN11Q06124 597 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 PDAP1Q13442 181 aaKnown RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 ZNF667Q5HYK9 610 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 NCCRP1Q6ZVX7 275 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-202ENST00000318266 C12orf29Q8N999 325 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 ACVR1CQ8NER5 493 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 FAM110BQ8TC76 370 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 IRGQQ8WZA9 623 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 THAP11Q96EK4 314 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 OSBPL6Q9BZF3 934 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 ELOVL4Q9GZR5 314 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 PORCNQ9H237 461 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 FAM96AQ9H5X1 160 aa9.86□□□□□ -0.83
PTPRA-202ENST00000318266 A0A096LPK6 155 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 TPST1O60507 370 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 PIGNO95427 931 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 ALOX15P16050 662 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-202ENST00000318266 GLDCP23378 1020 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 EPHX2P34913 555 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 MAGEA3P43357 314 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 NAMPTP43490 491 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 PHKA2P46019 1235 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 RXRGP48443 463 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 CD97P48960 835 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 NAGLUP54802 743 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 CTBSQ01459 385 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 IKBKEQ14164 716 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 XKR3Q5GH77 459 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 SEL1L3Q68CR1 1132 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 GK5Q6ZS86 529 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 SPATA6LQ8N4H0 392 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 C12orf43Q96C57 262 aaKnown RBP9.85□□□□□ -0.83
PTPRA-202ENST00000318266 ILKAPQ9H0C8 392 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-202ENST00000318266 PLGRKTQ9HBL7 147 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 TUBGCP4Q9UGJ1 667 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 AP4S1Q9Y587 144 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 TRPM7Q96QT4 1865 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 SAC3D1A6NKF1 404 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 C2CD4BA6NLJ0 364 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 KCNU1A8MYU2 1149 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 J3QRK9 145 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 PSMD12O00232 456 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-202ENST00000318266 GIPC1O14908 333 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 TNNC2P02585 160 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 GJB1P08034 283 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 AVPR1AP37288 418 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 HSPA13P48723 471 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 NIPAL4Q0D2K0 466 aa9.85□□□□□ -0.83
PTPRA-202ENST00000318266 ITGA7Q13683 1181 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms