RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 DNAI2Q9GZS0 605 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 COQ10BQ9H8M1 238 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 MARCH7Q9H992 704 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 DCDC2Q9UHG0 476 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 COL4A5P29400 1685 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 NCF1BA6NI72 391 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 NCF1CA8MVU1 366 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 APOC4-APOC2K7ER74 178 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 PSMD12O00232 456 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 SPTLC1O15269 473 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 VAPBO95292 243 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 APOC2P02655 101 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 NCF1P14598 390 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 ATP6V1B2P21281 511 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 MUTP22033 750 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 CYP2F1P24903 491 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 ZNF280AP59817 542 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 CAPRIN1Q14444 709 aaKnown RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 POU6F1Q14863 301 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 IMPG1Q17R60 797 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 RGS21Q2M5E4 152 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 GOLGA7BQ2TAP0 167 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 TRIM60Q495X7 471 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 TEDDM1Q5T9Z0 273 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 PRR23BQ6ZRT6 265 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 PDZD4Q76G19 769 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 STK32CQ86UX6 486 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 FAM83AQ86UY5 434 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 PDSS2Q86YH6 399 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 DCAKDQ8WVC6 231 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 SKA2Q8WVK7 121 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 GATA6Q92908 595 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 MKL1Q969V6 931 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 TUBGCP3Q96CW5 907 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 VPS39Q96JC1 886 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 P2RX7Q99572 595 aaKnown RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 SLC39A3Q9BRY0 314 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 MRPL4Q9BYD3 311 aaKnown RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 TRIM15Q9C019 465 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 VPS33BQ9H267 617 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 ABCB10Q9NRK6 738 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 TMEM216Q9P0N5 145 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 DSEQ9UL01 958 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 COQ6Q9Y2Z9 468 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 IRS2Q9Y4H2 1338 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 CYP3A7-CYP3A51PA0A087WV96 503 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 A0A087WXM4 84 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 A0A1W2PPW3 197 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 MYO1GB0I1T2 1018 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 SNX2O60749 519 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 DEAF1O75398 565 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 ITGAVP06756 1048 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 CHRNGP07510 517 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 PTPRAP18433 802 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 CDKN2BP42772 138 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 PSME3P61289 254 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 FASTKQ14296 549 aaKnown RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 CYP51A1Q16850 503 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 FBXO48Q5FWF7 155 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 MOXD1Q6UVY6 613 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 RAB44Q7Z6P3 723 aaPredicted RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 TMEM161BQ8NDZ6 487 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 OR52K1Q8NGK4 314 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 BSNDQ8WZ55 320 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 PTCD3Q96EY7 689 aaKnown RBP7.68□□□□□ -1.18
CDHR3-201ENST00000317716 KIF12Q96FN5 646 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 RNF145Q96MT1 663 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 ASB3Q9Y575 518 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 LAMB2P55268 1798 aa7.68□□□□□ -1.18
CDHR3-201ENST00000317716 TMEM191CA6NGB0 347 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 KCNU1A8MYU2 1149 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 TAF4O00268 1085 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 NRP2O60462 931 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 LRCH4O75427 683 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 CST3P01034 146 aaPredicted RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 CXCL8P10145 99 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 PSMA4P25789 261 aaKnown RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 PSMB9P28065 219 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 SULT1E1P49888 294 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 NT5C2P49902 561 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 SEPHS1P49903 392 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 YWHAZP63104 245 aaKnown RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 POLD3Q15054 466 aaPredicted RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 SLC9B1Q4ZJI4 515 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 TREML2Q5T2D2 321 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 TMEM63BQ5T3F8 832 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 AAGABQ6PD74 315 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 KLHL35Q6PF15 583 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 SCIMPQ6UWF3 145 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 TMEM110Q86TL2 294 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 DHFR2Q86XF0 187 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 SLC4A11Q8NBS3 891 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 DENND1AQ8TEH3 1009 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 KLRG1Q96E93 195 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 CELF6Q96J87 481 aaKnown RBP7.67□□□□□ -1.18
CDHR3-201ENST00000317716 MAML3Q96JK9 1138 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 OR52B2Q96RD2 323 aa7.67□□□□□ -1.18
CDHR3-201ENST00000317716 ZIC5Q96T25 663 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms