RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 KDSRQ06136 332 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SNTA1Q13424 505 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SLC1A5Q15758 541 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 INAVAQ3KP66 663 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 STRIP1Q5VSL9 837 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 BNC2Q6ZN30 1099 aaPredicted RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 LYSMD3Q7Z3D4 306 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 DSG4Q86SJ6 1040 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 TRABD2AQ86V40 505 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 FBXO11Q86XK2 927 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 MAPKAPK5Q8IW41 473 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 DAW1Q8N136 415 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 PQLC1Q8N2U9 271 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 FAM109AQ8N4B1 249 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SHKBP1Q8TBC3 707 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 ARHGEF26Q96DR7 871 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 RTP4Q96DX8 246 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 REXO5Q96IC2 774 aaKnown RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 LRGUKQ96M69 825 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 C1orf50Q9BV19 199 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 VPS11Q9H270 941 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 VPS37BQ9H9H4 285 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 KCNK13Q9HB14 408 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 SCUBE2Q9NQ36 999 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 DNMT3BQ9UBC3 853 aaKnown RBP6.8□□□□□ -1.32
ZNF540-201ENST00000316433 GTF2IRD1Q9UHL9 959 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 VPS4AQ9UN37 437 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 AP4S1Q9Y587 144 aa6.8□□□□□ -1.32
ZNF540-201ENST00000316433 C2orf81A6NN90 581 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 H3BNH8 94 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 YKT6O15498 198 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 KRT18P05783 430 aaKnown RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 S100A6P06703 90 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 CA4P22748 312 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 RPA3P35244 121 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 HK2P52789 917 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 AP2S1P53680 142 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 PRAMEP78395 509 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 DUSP7Q16829 419 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 SNAP47Q5SQN1 464 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 CYP20A1Q6UW02 462 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 MON1BQ7L1V2 547 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 DNAAF5Q86Y56 855 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 TCAIMQ8N3R3 496 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 ZNF276Q8N554 614 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 SLC4A11Q8NBS3 891 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 JDP2Q8WYK2 163 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 FIG4Q92562 907 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 P2RX7Q99572 595 aaKnown RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 HEMGNQ9BXL5 484 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 EMILIN2Q9BXX0 1053 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 TRPV6Q9H1D0 765 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 LIN7BQ9HAP6 207 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 MRM3Q9HC36 420 aaKnown RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 MAGEE1Q9HCI5 957 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 KLQ9UEF7 1012 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 MYRFQ9Y2G1 1151 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 TMX2Q9Y320 296 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 FARP1Q9Y4F1 1045 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 ST14Q9Y5Y6 855 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 PDCD11Q14690 1871 aaKnown RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 PCM1Q15154 2024 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 TEX51A0A1B0GUA7 166 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 EVPLLA8MZ36 301 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 ANKRD63C9JTQ0 380 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 ERVH48-1M5A8F1 160 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 NDUFA2O43678 99 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 PROSCO94903 275 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 OLFM2O95897 454 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 ABCB4P21439 1286 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 JAK3P52333 1124 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 ARL4CP56559 192 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 SRP54P61011 504 aaKnown RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 CDKL1Q00532 357 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 GALNT2Q10471 571 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 SNX17Q15036 470 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 ZYXQ15942 572 aaKnown RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 CBWD6Q4V339 395 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 CBWD3Q5JTY5 395 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 CBWD5Q5RIA9 395 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 TRAPPC3LQ5T215 181 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 UNC5AQ6ZN44 842 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 RTKN2Q8IZC4 609 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 ADGRG5Q8IZF4 528 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 SLC44A5Q8NCS7 719 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 CDC26Q8NHZ8 85 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 HM13Q8TCT9 377 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 TTC17Q96AE7 1141 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 COA7Q96BR5 231 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 WRNIP1Q96S55 665 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 GCOM2Q9BZD3 368 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 TRABDQ9H4I3 376 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 TNFRSF10DQ9UBN6 386 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 NUP50Q9UKX7 468 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 PSMD13Q9UNM6 376 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 MRPL11Q9Y3B7 192 aaKnown RBP6.79□□□□□ -1.32
ZNF540-201ENST00000316433 PCDHA1Q9Y5I3 950 aa6.79□□□□□ -1.32
ZNF540-201ENST00000316433 SF3B1O75533 1304 aaKnown RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms