RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 OR10G6Q8NH81 332 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 MPP6Q9NZW5 540 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 COL20A1Q9P218 1284 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 SIGLEC16A6NMB1 481 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 RBP1P09455 135 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 MAPK1P28482 360 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 DNAJC3Q13217 504 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 TMC5Q6UXY8 1006 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 STX19Q8N4C7 294 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 PIF1Q9H611 641 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 RBPJLQ9UBG7 517 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 C1orf232A0A0U1RR37 186 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 KLHL2O95198 593 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 FAM107AO95990 144 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 ENO2P09104 434 aaPredicted RBP13.75□□□□□ -0.21
RFFL-201ENST00000315249 PAX3P23760 479 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 RBL1P28749 1068 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 ECM1Q16610 540 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 FIGNQ5HY92 759 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 CTU1Q7Z7A3 348 aaKnown RBP13.75□□□□□ -0.21
RFFL-201ENST00000315249 TNIP2Q8NFZ5 429 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 CASKIN2Q8WXE0 1202 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 PHF21AQ96BD5 680 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 RBBP8Q99708 897 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 MYOM1P52179 1685 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 ERVK-21P61565 698 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 MMRN1Q13201 1228 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 SPPL2BQ8TCT7 592 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 SEMA4DQ92854 862 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 BBS4Q96RK4 519 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 TMPRSS4Q9NRS4 437 aa13.75□□□□□ -0.21
RFFL-201ENST00000315249 DUS2Q9NX74 493 aaKnown RBP13.75□□□□□ -0.21
RFFL-201ENST00000315249 BTN3A1O00481 513 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 ZNF862O60290 1169 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 CCNE2O96020 404 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 PEX19P40855 299 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 HTRA3P83110 453 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 BMPR2Q13873 1038 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 MON1AQ86VX9 555 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 EPS8L3Q8TE67 593 aaKnown RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 FAM84AQ96KN4 292 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 DUSP16Q9BY84 665 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 ZNF510Q9Y2H8 683 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 ARL2BPQ9Y2Y0 163 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 ASTN1O14525 1302 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 AKAP12Q02952 1782 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 MDM4O15151 490 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 CCNB1P14635 433 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 SLC2A4P14672 509 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 OVGP1Q12889 678 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 ACAP1Q15027 740 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 IL17AQ16552 155 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 C12orf50Q8NA57 414 aaPredicted RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 RMND5AQ9H871 391 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 MSI1O43347 362 aaKnown RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 GSTM1P09488 218 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 GTF2E2P29084 291 aaKnown RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 SKP1P63208 163 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 MGAT5Q09328 741 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 ALFQ53S48 1182 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 TOP6BLQ8N6T0 577 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 LRRC52Q8N7C0 313 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 DNPEPQ9ULA0 475 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 GTF2A1LQ9UNN4 478 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 SMIM28A0A1B0GU29 152 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 INPP4BO15327 924 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 PSMB4P28070 264 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 PSMD8P48556 350 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 NDRG1Q92597 394 aaKnown RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 ZIM3Q96PE6 472 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 ARL15Q9NXU5 204 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 KIAA1522Q9P206 1035 aaPredicted RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 GSAPA4D1B5 854 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 PDE2AO00408 941 aaPredicted RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 RNASEH2AO75792 299 aaKnown RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 CORO1AP31146 461 aaKnown RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 MDH1P40925 334 aaKnown RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 GRAMD4Q6IC98 578 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 CYGBQ8WWM9 190 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 COL26A1Q96A83 441 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 SEMA3CQ99985 751 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 HSD17B14Q9BPX1 270 aa13.74□□□□□ -0.21
RFFL-201ENST00000315249 C11orf84Q9BUA3 381 aaPredicted RBP13.74□□□□□ -0.21
RFFL-201ENST00000315249 KLRG2A4D1S0 409 aaPredicted RBP13.73□□□□□ -0.21
RFFL-201ENST00000315249 EPHX1P07099 455 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 PBX3P40426 434 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 NLRP9Q7RTR0 991 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 DTX3LQ8TDB6 740 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 PCDH9Q9HC56 1237 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 ARVCFO00192 962 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 ELFN1P0C7U0 828 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 PLK1P53350 603 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 CDKAL1Q5VV42 579 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 LRIG3Q6UXM1 1119 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 LRRN4Q8WUT4 740 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 LACRTQ9GZZ8 138 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 HACD1B0YJ81 288 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 BMP10O95393 424 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 IMPDH2P12268 514 aa13.73□□□□□ -0.21
RFFL-201ENST00000315249 ST13P4Q8IZP2 240 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms