RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NAIF1Q69YI7 327 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PMF1Q6P1K2 205 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 MZT2AQ6P582 158 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 OTOP1Q7RTM1 612 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 GSPT2Q8IYD1 628 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 PARD3BQ8TEW8 1205 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 RIN2Q8WYP3 895 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 RIT1Q92963 219 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 TMEM79Q9BSE2 394 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 CLPBQ9H078 707 aa8.99□□□□□ -0.97
COL6A5-202ENST00000312481 HBS1LQ9Y450 684 aaKnown RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 MTF2Q9Y483 593 aaPredicted RBP8.99□□□□□ -0.97
COL6A5-202ENST00000312481 SASH3O75995 380 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 GLP2RO95838 553 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 ECDO95905 644 aaPredicted RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 CCR1P32246 355 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 RALGPS1Q5JS13 557 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 GALNT15Q8N3T1 639 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 EPS8L3Q8TE67 593 aaKnown RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 KAZALD1Q96I82 304 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 QKIQ96PU8 341 aaKnown RBP eCLIP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 WDCPQ9H6R7 721 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 IRAK4Q9NWZ3 460 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 ADAMTS7Q9UKP4 1686 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 AIM2O14862 343 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 RGS14O43566 566 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 TADA2AO75478 443 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 CD44P16070 742 aaKnown RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 PROZP22891 400 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 BLVRAP53004 296 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 PAGE2BQ5JRK9 111 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 C6orf10Q5SRN2 563 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 CCDC36Q8IYA8 594 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 STON2Q8WXE9 905 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 PORCNQ9H237 461 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 DENND2DQ9H6A0 471 aaPredicted RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 CACNA1SQ13698 1873 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 WWP2O00308 870 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 NR4A1P22736 598 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 MDH1BQ5I0G3 518 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 C1orf186Q6ZWK4 172 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 PIGWQ7Z7B1 504 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 SH3BP4Q9P0V3 963 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 TMEM191CA6NGB0 347 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 CALCAP01258 141 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 NMT1P30419 496 aaKnown RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 TNFAIP8L3Q5GJ75 292 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 FAM71DQ8N9W8 422 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 TMEM174Q8WUU8 243 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 EPB41L4BQ9H329 900 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 GMIPQ9P107 970 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 UXTQ9UBK9 157 aaPredicted RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 AP4E1Q9UPM8 1137 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 CLEC11AQ9Y240 323 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 MYL12AP19105 171 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 MVKQ03426 396 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 TRIP4Q15650 581 aaPredicted RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 SV2AQ7L0J3 742 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 CCDC103Q8IW40 242 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 C8orf59Q8N0T1 100 aaPredicted RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 CELF1Q92879 486 aaKnown RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 C17orf80Q9BSJ5 609 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 PLEKHA4Q9H4M7 779 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 DPP3Q9NY33 737 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF510Q9Y2H8 683 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 PSMD12O00232 456 aaPredicted RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 SEMA3DO95025 777 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 ITGALP20701 1170 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 BACE1P56817 501 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 ABRQ12979 859 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 IRF5Q13568 498 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 SCARF1Q14162 830 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 DEFB107AQ8IZN7 70 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 CENPLQ8N0S6 344 aaPredicted RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 OR7A2PQ8NGA2 310 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 RBM4BQ9BQ04 359 aaKnown RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 KCTD14Q9BQ13 255 aaPredicted RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 RBM4Q9BWF3 364 aaKnown RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 ADPRHL2Q9NX46 363 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 WBP11Q9Y2W2 641 aaKnown RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 ATP4AP20648 1035 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 GSTT1P30711 240 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 NUP62P37198 522 aaPredicted RBP8.98□□□□□ -0.97
COL6A5-202ENST00000312481 ASMTP46597 345 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 TUBA1BP68363 451 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 ARHGEF7Q14155 803 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 TUBA1AQ71U36 451 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 GDPD5Q8WTR4 605 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 SCN2AQ99250 2005 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 TUBA1CQ9BQE3 449 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 KRT84Q9NSB2 600 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 INTS13Q9NVM9 706 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF446Q9NWS9 450 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 HAO1Q9UJM8 370 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 RNF112Q9ULX5 631 aa8.98□□□□□ -0.97
COL6A5-202ENST00000312481 MRPS14O60783 128 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 TUFMP49411 452 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 AUHQ13825 339 aaKnown RBP8.97□□□□□ -0.97
COL6A5-202ENST00000312481 ADGRG6Q86SQ4 1221 aa8.97□□□□□ -0.97
COL6A5-202ENST00000312481 ITIH5Q86UX2 942 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms