RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 NDST2P52849 883 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 GEMIN4P57678 1058 aaKnown RBP17.14■□□□□ 0.33
CLCF1-201ENST00000312438 KLHL38Q2WGJ6 581 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 RAP1GAP2Q684P5 730 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 TIGD7Q6NT04 549 aaPredicted RBP17.14■□□□□ 0.33
CLCF1-201ENST00000312438 KLHL23Q8NBE8 558 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 PHOSPHO2Q8TCD6 241 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 FBF1Q8TES7 1133 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 ARHGEF2Q92974 986 aaKnown RBP17.14■□□□□ 0.33
CLCF1-201ENST00000312438 SIGLEC10Q96LC7 697 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 RAD9AQ99638 391 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 ACSS3Q9H6R3 686 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 EURLQ9NYK6 297 aa17.14■□□□□ 0.33
CLCF1-201ENST00000312438 CXXC1Q9P0U4 656 aaPredicted RBP17.14■□□□□ 0.33
CLCF1-201ENST00000312438 KIAA0100Q14667 2235 aaKnown RBP17.13■□□□□ 0.33
CLCF1-201ENST00000312438 ERI2A8K979 691 aaKnown RBP17.13■□□□□ 0.33
CLCF1-201ENST00000312438 POC1B-GALNT4F8VUJ3 575 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 COCHO43405 550 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 MAFKO60675 156 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 CCNB1P14635 433 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 MDH1P40925 334 aaKnown RBP17.13■□□□□ 0.33
CLCF1-201ENST00000312438 GRIA1P42261 906 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 HARS2P49590 506 aaKnown RBP17.13■□□□□ 0.33
CLCF1-201ENST00000312438 ZBTB17Q13105 803 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 ITIH5Q86UX2 942 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 EXOC3L1Q86VI1 746 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 AGGF1Q8N302 714 aaeCLIP17.13■□□□□ 0.33
CLCF1-201ENST00000312438 PSMG2Q969U7 264 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 AGAP3Q96P47 875 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 CTNNAL1Q9UBT7 734 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 ZC3H7BQ9UGR2 993 aaKnown RBP17.13■□□□□ 0.33
CLCF1-201ENST00000312438 RSPH14Q9UHP6 348 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 INSL5Q9Y5Q6 135 aa17.13■□□□□ 0.33
CLCF1-201ENST00000312438 TRDMT1O14717 391 aaKnown RBP17.12■□□□□ 0.33
CLCF1-201ENST00000312438 CXCL14O95715 111 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 CNPP09543 421 aaKnown RBP17.12■□□□□ 0.33
CLCF1-201ENST00000312438 GCAP28676 217 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 CD68P34810 354 aaPredicted RBP17.12■□□□□ 0.33
CLCF1-201ENST00000312438 PAPOLAP51003 745 aaKnown RBP17.12■□□□□ 0.33
CLCF1-201ENST00000312438 IRAK1P51617 712 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 KCNQ1P51787 676 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 NR1H3Q13133 447 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 PLD1Q13393 1074 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 ARHGAP36Q6ZRI8 547 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 HERC6Q8IVU3 1022 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 HERVK_113Q902F9 699 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 IGSF8Q969P0 613 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 AZIN2Q96A70 460 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 RPRD1AQ96P16 312 aaPredicted RBP17.12■□□□□ 0.33
CLCF1-201ENST00000312438 CYTH2Q99418 400 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 EBNA1BP2Q99848 306 aaKnown RBP17.12■□□□□ 0.33
CLCF1-201ENST00000312438 GBA3Q9H227 469 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 RETREG1Q9H6L5 497 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 TBK1Q9UHD2 729 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 SLC4A7Q9Y6M7 1214 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 ARHGAP42A6NI28 874 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 SDR42E2A6NKP2 422 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 F5H423 210 aaPredicted RBP17.12■□□□□ 0.33
CLCF1-201ENST00000312438 ACSL4O60488 711 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 CPP00450 1065 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 TACR2P21452 398 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 CA8P35219 290 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 SLC11A2P49281 568 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 GNGT1P63211 74 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 PRPSAP1Q14558 356 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 PABPC1LQ4VXU2 614 aaKnown RBP17.12■□□□□ 0.33
CLCF1-201ENST00000312438 ALFQ53S48 1182 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 NADSYN1Q6IA69 706 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 TMC7Q7Z402 723 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 CHSY1Q86X52 802 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 CYP4X1Q8N118 509 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
CLCF1-201ENST00000312438 MAML1Q92585 1016 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 PLD4Q96BZ4 506 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 XPO6Q96QU8 1125 aaKnown RBP17.12■□□□□ 0.33
CLCF1-201ENST00000312438 ASB3Q9Y575 518 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 ACTL7BQ9Y614 415 aa17.12■□□□□ 0.33
CLCF1-201ENST00000312438 PSMD3O43242 534 aa17.11■□□□□ 0.33
CLCF1-201ENST00000312438 CNTN5O94779 1100 aa17.11■□□□□ 0.33
CLCF1-201ENST00000312438 SUN1O94901 812 aa17.11■□□□□ 0.33
CLCF1-201ENST00000312438 AP2A1O95782 977 aa17.11■□□□□ 0.33
CLCF1-201ENST00000312438 STX2P32856 288 aa17.11■□□□□ 0.33
CLCF1-201ENST00000312438 GUCY1A3Q02108 690 aa17.11■□□□□ 0.33
CLCF1-201ENST00000312438 C5orf22Q49AR2 442 aa17.11■□□□□ 0.33
CLCF1-201ENST00000312438 CCNJLQ8IV13 435 aa17.11■□□□□ 0.33
CLCF1-201ENST00000312438 IL12RB2Q99665 862 aa17.11■□□□□ 0.33
CLCF1-201ENST00000312438 NOL6Q9H6R4 1146 aaKnown RBP17.11■□□□□ 0.33
CLCF1-201ENST00000312438 PRDM10Q9NQV6 1147 aa17.11■□□□□ 0.33
CLCF1-201ENST00000312438 IPO11Q9UI26 975 aaKnown RBP17.11■□□□□ 0.33
CLCF1-201ENST00000312438 GOLGA6L7A0A1B0GV03 622 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 TCRBV9S1A1TA0A576 114 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 F5H5T6 163 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 TGM5O43548 720 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 CACNG3O60359 315 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 NFKB1P19838 968 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 BMPR1AP36894 532 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 ANO4Q32M45 955 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 KCTD11Q693B1 232 aa17.1■□□□□ 0.33
CLCF1-201ENST00000312438 LILRA6Q6PI73 481 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms