RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 LYSMD3Q7Z3D4 306 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 PPWD1Q96BP3 646 aaKnown RBP18.43■□□□□ 0.54
SPSB4-201ENST00000310546 ITPKCQ96DU7 683 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 TUBA8Q9NY65 449 aaPredicted RBP18.43■□□□□ 0.54
SPSB4-201ENST00000310546 TMEM216Q9P0N5 145 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 COPG2Q9UBF2 871 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 NUB1Q9Y5A7 615 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 CORINQ9Y5Q5 1042 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 TCRBV5S1A1TA0A578 114 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 VNN1O95497 513 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 ADORA2AP29274 412 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 ETFBP38117 255 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 AARS2Q5JTZ9 985 aaKnown RBP18.43■□□□□ 0.54
SPSB4-201ENST00000310546 METTL21CQ5VZV1 264 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 TTC33Q6PID6 262 aaPredicted RBP18.43■□□□□ 0.54
SPSB4-201ENST00000310546 IFNLR1Q8IU57 520 aaPredicted RBP18.43■□□□□ 0.54
SPSB4-201ENST00000310546 GPC2Q8N158 579 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 HM13Q8TCT9 377 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 MOCOSQ96EN8 888 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 MARK4Q96L34 752 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 NAA50Q9GZZ1 169 aaKnown RBP18.43■□□□□ 0.54
SPSB4-201ENST00000310546 TJP2Q9UDY2 1190 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 FEM1BQ9UK73 627 aa18.43■□□□□ 0.54
SPSB4-201ENST00000310546 DICER1Q9UPY3 1922 aaKnown RBP18.42■□□□□ 0.54
SPSB4-201ENST00000310546 A0A087WXM4 84 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 TESPA1A2RU30 521 aaPredicted RBP18.42■□□□□ 0.54
SPSB4-201ENST00000310546 CNOT3O75175 753 aaKnown RBP18.42■□□□□ 0.54
SPSB4-201ENST00000310546 GNAO1P09471 354 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 KRT3P12035 628 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 CKMT2P17540 419 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 ITGB5P18084 799 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 GABRB3P28472 473 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 SERPINB9P50453 376 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 IGBP1P78318 339 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 SCARA3Q6AZY7 606 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 GPAT2Q6NUI2 795 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 CASC4Q6P4E1 433 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 TMEM26Q6ZUK4 368 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 PCDHAC1Q9H158 963 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 NOL11Q9H8H0 719 aaKnown RBP18.42■□□□□ 0.54
SPSB4-201ENST00000310546 KCNH7Q9NS40 1196 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 CNOT11Q9UKZ1 510 aaKnown RBP18.42■□□□□ 0.54
SPSB4-201ENST00000310546 CDY2AQ9Y6F7 541 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 CDY1Q9Y6F8 540 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 FAM159BA6NKW6 160 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 GOLGA8TH3BQL2 631 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 UGCGQ16739 394 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 FAM160B2Q86V87 743 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 SLC15A4Q8N697 577 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 TMEM35BQ8NCS4 154 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 TAAR1Q96RJ0 339 aa18.42■□□□□ 0.54
SPSB4-201ENST00000310546 TRIM16LQ309B1 348 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 BSNDQ8WZ55 320 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 CDH19Q9H159 772 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 GIT1Q9Y2X7 761 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 C1orf232A0A0U1RR37 186 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 CFAP99D6REC4 459 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 C4BPAP04003 597 aaKnown RBP18.41■□□□□ 0.54
SPSB4-201ENST00000310546 ZNF182P17025 639 aaPredicted RBP18.41■□□□□ 0.54
SPSB4-201ENST00000310546 BACE1P56817 501 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 TRAF2Q12933 501 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 TMEM198Q66K66 360 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 NXNQ6DKJ4 435 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 ZNF280CQ8ND82 737 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 STARD8Q92502 1023 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 DRC3Q9H069 523 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 R3HDMLQ9H3Y0 253 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 PAK5Q9P286 719 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 HESX1Q9UBX0 185 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 CROTQ9UKG9 612 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 CDH7Q9ULB5 785 aa18.41■□□□□ 0.54
SPSB4-201ENST00000310546 MRPL11Q9Y3B7 192 aaKnown RBP18.41■□□□□ 0.54
SPSB4-201ENST00000310546 ACOT8O14734 319 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 HTRA2O43464 458 aaPredicted RBP18.4■□□□□ 0.54
SPSB4-201ENST00000310546 KDM1AO60341 852 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 SULT1C4O75897 302 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 CAPNS1P04632 268 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 TCF7P36402 384 aaPredicted RBP18.4■□□□□ 0.54
SPSB4-201ENST00000310546 GRIA1P42261 906 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 HARS2P49590 506 aaKnown RBP18.4■□□□□ 0.54
SPSB4-201ENST00000310546 RPS6P62753 249 aaKnown RBP18.4■□□□□ 0.54
SPSB4-201ENST00000310546 CRADDP78560 199 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 PMS2P3Q13401 168 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 DPYSQ14117 519 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 ZBTB49Q6ZSB9 765 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 PGAM4Q8N0Y7 254 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 NIPA2Q8N8Q9 360 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 TAMM41Q96BW9 452 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 RIT2Q99578 217 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 NPAS2Q99743 824 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 ACO2Q99798 780 aaKnown RBP18.4■□□□□ 0.54
SPSB4-201ENST00000310546 SACM1LQ9NTJ5 587 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 GIN1Q9NXP7 522 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 NCKIPSDQ9NZQ3 722 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 F5H423 210 aaPredicted RBP18.4■□□□□ 0.54
SPSB4-201ENST00000310546 PLA2G6O60733 806 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 ESRRBO95718 433 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 LDHAP00338 332 aaKnown RBP18.4■□□□□ 0.54
SPSB4-201ENST00000310546 NME3Q13232 169 aa18.4■□□□□ 0.54
SPSB4-201ENST00000310546 TDRD5Q8NAT2 981 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms