RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 EPB41L4AQ9HCS5 686 aaPredicted RBP15.75■□□□□ 0.11
HCFC1-201ENST00000310441 TAF6LQ9Y6J9 622 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 IRGCQ6NXR0 463 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 CYLDQ9NQC7 956 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 TULP4Q9NRJ4 1543 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 PDHBP11177 359 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 MBL2P11226 248 aaPredicted RBP15.75■□□□□ 0.11
HCFC1-201ENST00000310441 TNNI3P19429 210 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 FXR1P51114 621 aaKnown RBP eCLIP15.75■□□□□ 0.111e-6■■■□□ 16.9
HCFC1-201ENST00000310441 OVGP1Q12889 678 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 TRAP1Q12931 704 aaKnown RBP15.75■□□□□ 0.11
HCFC1-201ENST00000310441 SPIDRQ14159 915 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 PPP1R16AQ96I34 528 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 KLF6Q99612 283 aaPredicted RBP15.75■□□□□ 0.11
HCFC1-201ENST00000310441 AHCYL1O43865 530 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 CDK16Q00536 496 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 CYP2A13Q16696 494 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 DKK3Q9UBP4 350 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 LRPAP1P30533 357 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 PROSER1Q86XN7 944 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 CARNMT1Q8N4J0 409 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 ZNF248Q8NDW4 579 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 NECTIN3Q9NQS3 549 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 SNX6Q9UNH7 406 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 CHRNGP07510 517 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 RRM1P23921 792 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 MARC1Q5VT66 337 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 ZNF549Q6P9A3 640 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 NET1Q7Z628 596 aaPredicted RBP15.75■□□□□ 0.11
HCFC1-201ENST00000310441 FAM20CQ8IXL6 584 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 ADAM33Q9BZ11 813 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 IL22Q9GZX6 179 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 ZNRF3Q9ULT6 936 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 LOC100506127A0A0U1RQW1 187 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 B3GAT3O94766 335 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 THP07101 528 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 AP3S2P59780 193 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 CBWD3Q5JTY5 395 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 CBWD5Q5RIA9 395 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 UXTQ9UBK9 157 aaPredicted RBP15.74■□□□□ 0.11
HCFC1-201ENST00000310441 MDM4O15151 490 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 SLC25A12O75746 678 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 RAG1P15918 1043 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 GP5P40197 560 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.114e-7■■■■□ 21.6
HCFC1-201ENST00000310441 PTCD3Q96EY7 689 aaKnown RBP15.74■□□□□ 0.11
HCFC1-201ENST00000310441 CHID1Q9BWS9 393 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 SHCBP1LQ9BZQ2 653 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 THAP2Q9H0W7 228 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 GPN1Q9HCN4 374 aaPredicted RBP15.74■□□□□ 0.11
HCFC1-201ENST00000310441 A0A0B4J269 797 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 RBAK-RBAKDNI3L0D1 243 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 SEC22BO75396 215 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 TNFRSF21O75509 655 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 PGM3O95394 542 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 KCNJ1P48048 391 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 TNK2Q07912 1038 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 TUBB3Q13509 450 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 ZBTB14O43829 449 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 FGFR2P21802 821 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 NT5DC3Q86UY8 548 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 FAM172AQ8WUF8 416 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 NT5MQ9NPB1 228 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 INTS7Q9NVH2 962 aaKnown RBP15.74■□□□□ 0.11
HCFC1-201ENST00000310441 BCORL1Q5H9F3 1711 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 QSOX1O00391 747 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 MLYCDO95822 493 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 ACAT1P24752 427 aaKnown RBP15.74■□□□□ 0.11
HCFC1-201ENST00000310441 RPS12P25398 132 aaKnown RBP15.74■□□□□ 0.11
HCFC1-201ENST00000310441 CHN2P52757 468 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 TAF1CQ15572 869 aaPredicted RBP15.74■□□□□ 0.11
HCFC1-201ENST00000310441 STOX1Q6ZVD7 989 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 STK32CQ86UX6 486 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 UBA3Q8TBC4 463 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 GLT1D1Q96MS3 346 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 CYP4F12Q9HCS2 524 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 DDX20Q9UHI6 824 aaKnown RBP15.74■□□□□ 0.11
HCFC1-201ENST00000310441 PCDHB12Q9Y5F1 795 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 CHURC1-FNTBB4DL54 471 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 IDH3BO43837 385 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 SMNDC1O75940 238 aaKnown RBP eCLIP15.74■□□□□ 0.112e-10■■■□□ 15.2
HCFC1-201ENST00000310441 MYBL2P10244 700 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 ACTR3P61158 418 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 CCNIQ14094 377 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 MFSD7Q6UXD7 560 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 USP45Q70EL2 814 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 ANGPT4Q9Y264 503 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 MAGEB3O15480 346 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 MAGEC1O60732 1142 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 SLC26A3P40879 764 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 OLFML2AQ68BL7 652 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 RBM43Q6ZSC3 357 aaKnown RBP15.74■□□□□ 0.11
HCFC1-201ENST00000310441 KCNH7Q9NS40 1196 aa15.74■□□□□ 0.11
HCFC1-201ENST00000310441 URADA6NGE7 173 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 TCHHL1Q5QJ38 904 aaPredicted RBP15.73■□□□□ 0.11
HCFC1-201ENST00000310441 R3HCC1LQ7Z5L2 792 aaKnown RBP15.73■□□□□ 0.11
HCFC1-201ENST00000310441 CLVS1Q8IUQ0 354 aaPredicted RBP15.73■□□□□ 0.11
HCFC1-201ENST00000310441 TBCDQ9BTW9 1192 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 MID1IP1Q9NPA3 183 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 OPTCQ9UBM4 332 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms