RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 PHC3Q8NDX5 983 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 ACTRT2Q8TDY3 377 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 OMDQ99983 421 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 RABGEF1Q9UJ41 708 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 FAM205AQ6ZU69 1335 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 FASP25445 335 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 EPS8L3Q8TE67 593 aaKnown RBP11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 CASKIN2Q8WXE0 1202 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 FAIM2Q9BWQ8 316 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 ATXN3LQ9H3M9 355 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 HMX1Q9NP08 348 aaPredicted RBP11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 GPRC5DQ9NZD1 345 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 OPTCQ9UBM4 332 aa11.53□□□□□ -0.56
VCPIP1-201ENST00000310421 PSEN2P49810 448 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 MYL12BO14950 172 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 GCATO75600 419 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 RPL9P32969 192 aaKnown RBP11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 CCR3P51677 355 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 IL2P60568 153 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 FKBP1BP68106 108 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 SLC6A3Q01959 620 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 TAF13Q15543 124 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 EPHX4Q8IUS5 362 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 SLC44A2Q8IWA5 706 aaPredicted RBP11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 INTS13Q9NVM9 706 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 RWDD3Q9Y3V2 267 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 CCNDBP1O95273 360 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 KCNJ1P48048 391 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 FAM187BQ17R55 369 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 KLHL35Q6PF15 583 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 ACTL9Q8TC94 416 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 ACOX2Q99424 681 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 GPRC5CQ9NQ84 441 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 RPS6KA6Q9UK32 745 aa11.52□□□□□ -0.56
VCPIP1-201ENST00000310421 A0A087X0T9 212 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 NUDT14O95848 222 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 FAM228BP0C875 321 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 GP5P40197 560 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 STAT5AP42229 794 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 SLC1A6P48664 564 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 GRIK3Q13003 919 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 MACC1Q6ZN28 852 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 GPSM1Q86YR5 675 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 MCOLN2Q8IZK6 566 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 CHADO15335 359 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 EIF4BP23588 611 aaKnown RBP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 TTI2Q6NXR4 508 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 INTS5Q6P9B9 1019 aaKnown RBP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 UNC93AQ86WB7 457 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 CAVIN3Q969G5 261 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 CENPTQ96BT3 561 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 SPRTNQ9H040 489 aaPredicted RBP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 FBXO28Q9NVF7 368 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 LZTS1Q9Y250 596 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 TDRKHQ9Y2W6 561 aaKnown RBP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 C1QTNF3-AMACRE9PGA6 284 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 LTFP02788 710 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 TGFBR2P37173 567 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 C9orf16Q9BUW7 83 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 FAM126AQ9BYI3 521 aaPredicted RBP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 COQ6Q9Y2Z9 468 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 LRRC14BA6NHZ5 514 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 PLEKP08567 350 aaPredicted RBP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 CTSEP14091 401 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 SMIM11AP58511 58 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 FAM46CQ5VWP2 391 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 HJURPQ8NCD3 748 aaPredicted RBP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 FDXACB1Q9BRP7 624 aaPredicted RBP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 CLEC4MQ9H2X3 399 aaPredicted RBP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 TRIM10Q9UDY6 481 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 ZNF232Q9UNY5 417 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 GYS1P13807 737 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 KRT74Q7RTS7 529 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 TINF2Q9BSI4 451 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 RIBC2Q9H4K1 309 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 POLR1BQ9H9Y6 1135 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 A1CFQ9NQ94 594 aaKnown RBP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 SETD4Q9NVD3 440 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 HEY2Q9UBP5 337 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 SNX6Q9UNH7 406 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 PCDHA3Q9Y5H8 950 aa11.52□□□□□ -0.57
VCPIP1-201ENST00000310421 KLHL41O60662 606 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 ADH1AP07327 375 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 ZDHHC20Q5W0Z9 365 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 Q96MT0 163 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 INTS7Q9NVH2 962 aaKnown RBP11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 VAV3Q9UKW4 847 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 TPRKBQ9Y3C4 175 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 DUOX1Q9NRD9 1551 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 COL5A2P05997 1499 aaPredicted RBP11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 PIPSLA2A3N6 862 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 FGFR1P11362 822 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 CSHL1Q14406 222 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 SPANXN2Q5MJ10 180 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 RAD9BQ6WBX8 426 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 BRSK2Q8IWQ3 736 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 SLC25A23Q9BV35 468 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 KLHL31Q9H511 634 aa11.51□□□□□ -0.57
VCPIP1-201ENST00000310421 DUSP12Q9UNI6 340 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms