RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 PMM2O15305 246 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 IDH3BO43837 385 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 MYO1DO94832 1006 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 LYNP07948 512 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 HIST1H2AGP0C0S8 130 aaPredicted RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 VDRP11473 427 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 HIST1H2ADP20671 130 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 PSMA3P25788 255 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 DRG2P55039 364 aaKnown RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 GEMIN4P57678 1058 aaKnown RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 LPIN1Q14693 890 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 TTC27Q6P3X3 843 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.47□□□□□ -0.89
XCR1-201ENST00000309285 MIB1Q86YT6 1006 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 HIST1H2AHQ96KK5 128 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 HIST1H2AJQ99878 128 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 H2AFJQ9BTM1 129 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 TRIM62Q9BVG3 475 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 ZNF831Q5JPB2 1677 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 LTBP3Q9NS15 1303 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 RRN3P2A6NIE6 340 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 TRIM49D1C9J1S8 452 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 CNOT3O75175 753 aaKnown RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 USP1O94782 785 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 ENDOD1O94919 500 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 ZSCAN5DPP0CG00 497 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 CCDC166P0CW27 439 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 GPD1P21695 349 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 SH3D19Q5HYK7 790 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 ATG14Q6ZNE5 492 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 OR8H2Q8N162 312 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 ATPAF2Q8N5M1 289 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 UCMAQ8WVF2 138 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 CITED4Q96RK1 184 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 CEP44Q9C0F1 390 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 ASB7Q9H672 318 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 GBA2Q9HCG7 927 aaPredicted RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 VTA1Q9NP79 307 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 SNTG2Q9NY99 539 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 TNFSF13BQ9Y275 285 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 GOLGA8TH3BQL2 631 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 NCAM1P13591 858 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 ANPEPP15144 967 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 ACO1P21399 889 aaKnown RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 MMP8P22894 467 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 AKR1D1P51857 326 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 TRIM69Q86WT6 500 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 PHF13Q86YI8 300 aaPredicted RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 TERB1Q8NA31 727 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 IPMKQ8NFU5 416 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 RIN3Q8TB24 985 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 NAT14Q8WUY8 206 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 USP13Q92995 863 aaPredicted RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 TMEM169Q96HH4 297 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 PWWP2AQ96N64 755 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 CHID1Q9BWS9 393 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 LRRC19Q9H756 370 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 RSAD1Q9HA92 442 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 CTNNAL1Q9UBT7 734 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 TMEM59LQ9UK28 342 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 WDR37Q9Y2I8 494 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 HES2Q9Y543 173 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 SAC3D1A6NKF1 404 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 NDUFS3O75489 264 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 VNN1O95497 513 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 HSPA1AP0DMV8 641 aaKnown RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 HSPA1BP0DMV9 641 aaKnown RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 STILQ15468 1287 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 NRF1Q16656 503 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 CCDC142Q17RM4 750 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 C10orf120Q5SQS8 335 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 BNC2Q6ZN30 1099 aaPredicted RBP9.47□□□□□ -0.89
XCR1-201ENST00000309285 KATNAL2Q8IYT4 538 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 MTERF3Q96E29 417 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 ASPSCR1Q9BZE9 553 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 ABHD16BQ9H3Z7 469 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 SAR1AQ9NR31 198 aa9.47□□□□□ -0.89
XCR1-201ENST00000309285 MAP1BP46821 2468 aaKnown RBP9.46□□□□□ -0.89
XCR1-201ENST00000309285 KRT87PA6NCN2 255 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 ANGPT2O15123 496 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 TFE3P19532 575 aaPredicted RBP9.46□□□□□ -0.89
XCR1-201ENST00000309285 IL12RB1P42701 662 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 ARL4DP49703 201 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 NR1H2P55055 460 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 MROH9Q5TGP6 573 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 C11orf88Q6PI97 169 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 TAS1R3Q7RTX0 852 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 UNC45BQ8IWX7 931 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 CCDC33Q8N5R6 958 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 TSPAN14Q8NG11 270 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 SH3TC2Q8TF17 1288 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 RXFP2Q8WXD0 754 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 GPATCH2LQ9NWQ4 482 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 RSL24D1Q9UHA3 163 aaKnown RBP9.46□□□□□ -0.89
XCR1-201ENST00000309285 TSPAN16Q9UKR8 245 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 USP18Q9UMW8 372 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 A0A0G2JLL6 359 aaPredicted RBP9.46□□□□□ -0.89
XCR1-201ENST00000309285 BAIAP3O94812 1187 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 CFHP08603 1231 aa9.46□□□□□ -0.89
XCR1-201ENST00000309285 SNRPAP09012 282 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms