RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PSMB4P28070 264 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 GUCY1A3Q02108 690 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 SNX30Q5VWJ9 437 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 CAPN12Q6ZSI9 719 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 C3orf62Q6ZUJ4 267 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 TADA2BQ86TJ2 420 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 DDX53Q86TM3 631 aaKnown RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 PALM2Q8IXS6 379 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 RTL3Q8N8U3 475 aaKnown RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 ATP6V0D2Q8N8Y2 350 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 ZNF461Q8TAF7 563 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 ZSCAN18Q8TBC5 510 aaPredicted RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 MAML1Q92585 1016 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 ARHGEF2Q92974 986 aaKnown RBP12.19□□□□□ -0.46
TRIM40-205ENST00000307859 VAT1Q99536 393 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 DHRS4Q9BTZ2 278 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 PBX4Q9BYU1 374 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 IL23AQ9NPF7 189 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 TRHDEQ9UKU6 1024 aa12.19□□□□□ -0.46
TRIM40-205ENST00000307859 IGLV3-10A0A075B6K4 115 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 KCNK1O00180 336 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 C2CD2LO14523 706 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 TLR5O60602 858 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 AVILO75366 819 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 TBX18O95935 607 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 GSTA2P09210 222 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 IGFBP4P22692 258 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 LSP1P33241 339 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 TUBP50607 506 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 SARNPP82979 210 aaKnown RBP12.18□□□□□ -0.46
TRIM40-205ENST00000307859 NR1H3Q13133 447 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 MTA1Q13330 715 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 MTM1Q13496 603 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 RAB30Q15771 203 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 KLHL38Q2WGJ6 581 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 C10orf120Q5SQS8 335 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 ACBD5Q5T8D3 534 aaPredicted RBP12.18□□□□□ -0.46
TRIM40-205ENST00000307859 FAM117BQ6P1L5 589 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 ZNF771Q7L3S4 317 aaPredicted RBP12.18□□□□□ -0.46
TRIM40-205ENST00000307859 C14orf80Q86SX3 495 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 NLRP14Q86W24 1093 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 GPR65Q8IYL9 337 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 CYP4X1Q8N118 509 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 PDZD8Q8NEN9 1154 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 FBF1Q8TES7 1133 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 DEPDC1BQ8WUY9 529 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 HERVK_113Q902F9 699 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 CENPTQ96BT3 561 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 CELF6Q96J87 481 aaKnown RBP12.18□□□□□ -0.46
TRIM40-205ENST00000307859 BTN2A3PQ96KV6 586 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 SIGLEC10Q96LC7 697 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 CDK5RAP1Q96SZ6 601 aaKnown RBP12.18□□□□□ -0.46
TRIM40-205ENST00000307859 CEP41Q9BYV8 373 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 GBA3Q9H227 469 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 C11orf16Q9NQ32 467 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 SEPT10Q9P0V9 454 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 KLHL8Q9P2G9 620 aaPredicted RBP12.18□□□□□ -0.46
TRIM40-205ENST00000307859 PPARGC1AQ9UBK2 798 aaKnown RBP12.18□□□□□ -0.46
TRIM40-205ENST00000307859 ACTL7BQ9Y614 415 aa12.18□□□□□ -0.46
TRIM40-205ENST00000307859 HELZP42694 1942 aaKnown RBP12.17□□□□□ -0.46
TRIM40-205ENST00000307859 TCRBV9S1A1TA0A576 114 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 POC1B-GALNT4F8VUJ3 575 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 C1QAP02745 245 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 URODP06132 367 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 ACRP10323 421 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 HMGA1P17096 107 aaKnown RBP12.17□□□□□ -0.46
TRIM40-205ENST00000307859 CCNCP24863 283 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 PPM1AP35813 382 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 KPNA1P52294 538 aaPredicted RBP12.17□□□□□ -0.46
TRIM40-205ENST00000307859 GEMIN4P57678 1058 aaKnown RBP12.17□□□□□ -0.46
TRIM40-205ENST00000307859 ZBTB17Q13105 803 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 RAB33AQ14088 237 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 TMED2Q15363 201 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 MS4A13Q5J8X5 152 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 TTC19Q6DKK2 380 aaPredicted RBP12.17□□□□□ -0.46
TRIM40-205ENST00000307859 LRRC8BQ6P9F7 803 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 LRRC31Q6UY01 552 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 LEKR1Q6ZMV7 388 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 PID1Q7Z2X4 250 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 KLHDC8BQ8IXV7 354 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
TRIM40-205ENST00000307859 MYRFLQ96LU7 910 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 GORASP1Q9BQQ3 440 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 CCSER2Q9H7U1 834 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 PLAC1Q9HBJ0 212 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 PSMC3IPQ9P2W1 217 aaPredicted RBP12.17□□□□□ -0.46
TRIM40-205ENST00000307859 MSRAQ9UJ68 235 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 HBS1LQ9Y450 684 aaKnown RBP12.17□□□□□ -0.46
TRIM40-205ENST00000307859 TTLL3Q9Y4R7 772 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 YIPF1Q9Y548 306 aa12.17□□□□□ -0.46
TRIM40-205ENST00000307859 SLC12A8A0AV02 714 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 SUN1O94901 812 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 CPP00450 1065 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 CSH1P0DML2 217 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 CSH2P0DML3 217 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 RHOQP17081 205 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 STX2P32856 288 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 CD68P34810 354 aaPredicted RBP12.16□□□□□ -0.46
TRIM40-205ENST00000307859 GRIA1P42261 906 aa12.16□□□□□ -0.46
TRIM40-205ENST00000307859 EFTUD2Q15029 972 aaKnown RBP eCLIP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms