RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SAP30BPQ9UHR5 308 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 RGS14O43566 566 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 SERPINB7O75635 380 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ACADLP28330 430 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 GTF2BQ00403 316 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PPATQ06203 517 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ZNF783Q6ZMS7 281 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 USP45Q70EL2 814 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RASGEF1CQ8N431 466 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 HM13Q8TCT9 377 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RORBQ92753 470 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 C7orf26Q96N11 449 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 TMBIM4Q9HC24 238 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CNTNAP5Q8WYK1 1306 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 FAM170AA1A519 330 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ISPDA4D126 451 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 GRAP2O75791 330 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PET100P0DJ07 73 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ELOAQ14241 798 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 CYP4F22Q6NT55 531 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CCDC149Q6ZUS6 474 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 G2E3Q7L622 706 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 DNAJB3Q8WWF6 145 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 FAM162AQ96A26 154 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 SLC22A18Q96BI1 424 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ZFP42Q96MM3 310 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 SNTG2Q9NY99 539 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 TBC1D14Q9P2M4 693 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 NPC1O15118 1278 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PRDM1O75626 825 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CATSPER4Q7RTX7 472 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PEG10Q86TG7 708 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 SLC43A2Q8N370 569 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 HPDLQ96IR7 371 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 NLRP4Q96MN2 994 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ABHD16BQ9H3Z7 469 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 UPB1Q9UBR1 384 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 SLC25A13Q9UJS0 675 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 STUB1Q9UNE7 303 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 HSPE1-MOB4S4R3N1 261 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 DOT1LQ8TEK3 1739 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PECAM1P16284 738 aaPredicted RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 MAGEA8P43361 318 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CLCN5P51795 746 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ITKQ08881 620 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 SP140Q13342 867 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ABRAXAS1Q6UWZ7 409 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 GPALPP1Q8IXQ4 340 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RFWD2Q8NHY2 731 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CERKQ8TCT0 537 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ABHD8Q96I13 439 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PPP3R2Q96LZ3 170 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 SLC38A2Q96QD8 506 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CFL2Q9Y281 166 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 FER1L6Q2WGJ9 1857 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 IL1BP01584 269 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RXRBP28702 533 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 MRPS22P82650 360 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 C2orf80Q0P641 193 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CYP1B1Q16678 543 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PYHIN1Q6K0P9 492 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 IYDQ6PHW0 289 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 HPS1Q92902 700 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RBM4BQ9BQ04 359 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 RBM4Q9BWF3 364 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 MIEF1Q9NQG6 463 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 KLHL11Q9NVR0 708 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 M0QYV0 167 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 TBX2Q13207 712 aaPredicted RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 SPATA19Q7Z5L4 167 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PRPF39Q86UA1 669 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 TLK2Q86UE8 772 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 OR6B3Q8NGW1 331 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 AENQ8WTP8 325 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 SEPT5Q99719 369 aaPredicted RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 CLPBQ9H078 707 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RAB9BQ9NP90 201 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RUVBL1Q9Y265 456 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 HEY1Q9Y5J3 304 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 OTCP00480 354 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 NRIP1P48552 1158 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 PDCD4Q53EL6 469 aaKnown RBP4.09□□□□□ -1.76
USH2A-201ENST00000307340 ATF7IP2Q5U623 682 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 LRRC74BQ6ZQY2 392 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 OXR1Q8N573 874 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 FBXO22Q8NEZ5 403 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 ASB13Q8WXK3 278 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 EGFL8Q99944 293 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 POLR1EQ9GZS1 481 aaKnown RBP4.09□□□□□ -1.76
USH2A-201ENST00000307340 HSMCR30P0CW71 290 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 CYP2A6P11509 494 aaPredicted RBP4.09□□□□□ -1.76
USH2A-201ENST00000307340 ME2P23368 584 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 LTKP29376 864 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 MPP1Q00013 466 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 GPRC5AQ8NFJ5 357 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 HPS4Q9NQG7 708 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 SALL3Q9BXA9 1300 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 TRIM13O60858 407 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 VAV1P15498 845 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms