RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
SMIM4-201ENST00000307106 ULBP1Q9BZM6 244 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 UBXN6Q9BZV1 441 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 DNAI2Q9GZS0 605 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 CYP3A43Q9HB55 503 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 SLCO3A1Q9UIG8 710 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 MYO9AB2RTY4 2548 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 LRRK2Q5S007 2527 aa12.25□□□□□ -0.45
SMIM4-201ENST00000307106 K7ESM1 405 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 IRAK2O43187 625 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 PLRG1O43660 514 aaKnown RBP12.24□□□□□ -0.45
SMIM4-201ENST00000307106 GJB6O95452 261 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 ZBED1O96006 694 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 HLA-DRAP01903 254 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 CR2P20023 1033 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 INHBCP55103 352 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 CDH18Q13634 790 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 ELAVL3Q14576 367 aaKnown RBP12.24□□□□□ -0.45
SMIM4-201ENST00000307106 ZNF394Q53GI3 561 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 FAM133BQ5BKY9 247 aaKnown RBP12.24□□□□□ -0.45
SMIM4-201ENST00000307106 PITRM1Q5JRX3 1037 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 RNF219Q5W0B1 726 aaPredicted RBP12.24□□□□□ -0.45
SMIM4-201ENST00000307106 RBM44Q6ZP01 1051 aaKnown RBP12.24□□□□□ -0.45
SMIM4-201ENST00000307106 MMS22LQ6ZRQ5 1243 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 BHLHA9Q7RTU4 235 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 CARNMT1Q8N4J0 409 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 HJURPQ8NCD3 748 aaPredicted RBP12.24□□□□□ -0.45
SMIM4-201ENST00000307106 WDR36Q8NI36 951 aaKnown RBP12.24□□□□□ -0.45
SMIM4-201ENST00000307106 ARRDC3Q96B67 414 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 HEXIM2Q96MH2 286 aaKnown RBP12.24□□□□□ -0.45
SMIM4-201ENST00000307106 MYOCQ99972 504 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 SEMA3CQ99985 751 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 DUSP23Q9BVJ7 150 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 CALN1Q9BXU9 219 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 IMPG2Q9BZV3 1241 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 KBTBD4Q9NVX7 518 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 SMC3Q9UQE7 1217 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 CEP83Q9Y592 693 aa12.24□□□□□ -0.45
SMIM4-201ENST00000307106 ICE1Q9Y2F5 2266 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 CACNA1DQ01668 2161 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 TYW5A2RUC4 315 aaKnown RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 CPED1A4D0V7 1026 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 SCAMP1O15126 338 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 RNGTTO60942 597 aaKnown RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 NEBLO76041 1014 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 MOCS3O95396 460 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 SLC11A2P49281 568 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 ECT2LQ008S8 904 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 CEBPZQ03701 1054 aaKnown RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 ZNF177Q13360 481 aaPredicted RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 CDKN3Q16667 212 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 KNOP1Q1ED39 458 aaKnown RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 C4orf17Q53FE4 359 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 FSCBQ5H9T9 825 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 BSPRYQ5W0U4 402 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 CRTC1Q6UUV9 634 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 EFL1Q7Z2Z2 1120 aaKnown RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 CCDC117Q8IWD4 279 aaPredicted RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 TMEM145Q8NBT3 493 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 TMX3Q96JJ7 454 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 RPL10LQ96L21 214 aaKnown RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 PRICKLE1Q96MT3 831 aaPredicted RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 APOBEC3GQ9HC16 384 aaKnown RBP12.23□□□□□ -0.45
SMIM4-201ENST00000307106 NBASA2RRP1 2371 aa12.23□□□□□ -0.45
SMIM4-201ENST00000307106 SLC31A1O15431 190 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 ACSL4O60488 711 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 PPFIA2O75334 1257 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 TCEA3O75764 348 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 IGLV3-27P01718 113 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 ITGA2BP08514 1039 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 VAV1P15498 845 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 PRLRP16471 622 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 NNMTP40261 264 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 STK19P49842 368 aaPredicted RBP12.22□□□□□ -0.45
SMIM4-201ENST00000307106 SLC8A3P57103 927 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 RPS24P62847 133 aaKnown RBP12.22□□□□□ -0.45
SMIM4-201ENST00000307106 AMPD3Q01432 767 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 SRSF6Q13247 344 aaKnown RBP12.22□□□□□ -0.45
SMIM4-201ENST00000307106 SERINC3Q13530 473 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 AGBL4Q5VU57 503 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 NUGGCQ68CJ6 796 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 ZCCHC8Q6NZY4 707 aaKnown RBP12.22□□□□□ -0.45
SMIM4-201ENST00000307106 GUSBP11Q6P575 273 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 UNC45BQ8IWX7 931 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 OR13H1Q8NG92 308 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 GOLGA5Q8TBA6 731 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 KLK6Q92876 244 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 MYEOVQ96EZ4 313 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 SPAG5Q96R06 1193 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 BACH2Q9BYV9 841 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 NIF3L1Q9GZT8 377 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 LRRC4Q9HBW1 653 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 SLC39A2Q9NP94 309 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 ABCC13Q9NSE7 274 aa12.22□□□□□ -0.45
SMIM4-201ENST00000307106 TEP1Q99973 2627 aaKnown RBP12.22□□□□□ -0.45
SMIM4-201ENST00000307106 USP9YO00507 2555 aaPredicted RBP12.21□□□□□ -0.45
SMIM4-201ENST00000307106 CCDC187A0A096LP49 1063 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 YJEFN3A6XGL0 299 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 E7ENQ6 273 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms