RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 KLHL8Q9P2G9 620 aaPredicted RBP13.32□□□□□ -0.28
CCDC7-202ENST00000302316 H0YGN5 161 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 METTL18O95568 372 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 FGF19O95750 216 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 RHOP08100 348 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 PTPN3P26045 913 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 CCR2P41597 374 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 EPHA5P54756 1037 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 SLC7A9P82251 487 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 ZNF33AQ06730 810 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 GPS2Q13227 327 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 ADGRF1Q5T601 910 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 ZNF697Q5TEC3 545 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 ARHGAP36Q6ZRI8 547 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 CFAP52Q8N1V2 620 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 UMODL1-AS1Q8N2C9 162 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 PRICKLE1Q96MT3 831 aaPredicted RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 ZIM3Q96PE6 472 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 DDX50Q9BQ39 737 aaKnown RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 LMAN2LQ9H0V9 348 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 PABPC3Q9H361 631 aaKnown RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 CDC42EP4Q9H3Q1 356 aaKnown RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 ETNK1Q9HBU6 452 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 ZDHHC7Q9NXF8 308 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 DNMT3BQ9UBC3 853 aaKnown RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 LSM7Q9UK45 103 aaKnown RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 PLAAQ9Y263 795 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 MYO7AQ13402 2215 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 E7EVH7 732 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 F5H423 210 aaPredicted RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 TRDMT1O14717 391 aaKnown RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 SCAMP3O14828 347 aaKnown RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 LATS1O95835 1130 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 APRTP07741 180 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 CCNCP24863 283 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 MAPKAPK2P49137 400 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 PAPOLAP51003 745 aaKnown RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 NDST2P52849 883 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 GAD2Q05329 585 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 HIF1AQ16665 826 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 C5orf22Q49AR2 442 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 SHKBP1Q8TBC3 707 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 ADAMTS19Q8TE59 1207 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 EXOC4Q96A65 974 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 TCEAL4Q96EI5 215 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 TSGA13Q96PP4 275 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 SEMA4AQ9H3S1 761 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 NOL6Q9H6R4 1146 aaKnown RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 TLE6Q9H808 572 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 ZFP37Q9Y6Q3 630 aaPredicted RBP13.31□□□□□ -0.28
CCDC7-202ENST00000302316 DOCK4Q8N1I0 1966 aa13.31□□□□□ -0.28
CCDC7-202ENST00000302316 RASA4BC9J798 803 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 RASA4O43374 803 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 RAMP2O60895 175 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 PFKLP17858 780 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 OR1E1P30953 314 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 FDFT1P37268 417 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 ARL4CP56559 192 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 ZXDBP98169 803 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 ZBTB17Q13105 803 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 SEMA5AQ13591 1074 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 GPR158Q5T848 1215 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 DENND2CQ68D51 928 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 TIGD7Q6NT04 549 aaPredicted RBP13.3□□□□□ -0.28
CCDC7-202ENST00000302316 CENPUQ71F23 418 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 TRMT10CQ7L0Y3 403 aaKnown RBP13.3□□□□□ -0.28
CCDC7-202ENST00000302316 PID1Q7Z2X4 250 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 ZNF354CQ86Y25 554 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 LRRC49Q8IUZ0 686 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 TNS4Q8IZW8 715 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 LEMD2Q8NC56 503 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 HMCESQ96FZ2 354 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 SAYSD1Q9NPB0 183 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 ZNF212Q9UDV6 495 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 DENND4CQ5VZ89 1909 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 CCDC195A0A1B0GUA6 201 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 EPOPA6NHQ4 379 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 ARHGAP42A6NI28 874 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 TSPAN3O60637 253 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 MAFKO60675 156 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 PSMB4P28070 264 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 MAGEA6P43360 314 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 NRIP1P48552 1158 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 CDH4P55283 916 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 RPS24P62847 133 aaKnown RBP13.3□□□□□ -0.28
CCDC7-202ENST00000302316 TEAD2Q15562 447 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 ARHGAP15Q53QZ3 475 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 PPP1R21Q6ZMI0 780 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 IQCKQ8N0W5 287 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 AGAP3Q96P47 875 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 VAT1Q99536 393 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 SLC46A2Q9BY10 475 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 PRKD2Q9BZL6 878 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 EPB41L4BQ9H329 900 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 CFAP97Q9P2B7 532 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 IPO11Q9UI26 975 aaKnown RBP13.3□□□□□ -0.28
CCDC7-202ENST00000302316 STOML2Q9UJZ1 356 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 SH3BP1Q9Y3L3 701 aa13.3□□□□□ -0.28
CCDC7-202ENST00000302316 NUP205Q92621 2012 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms