RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CDH4P55283 916 aa25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 CTC1Q2NKJ3 1217 aa25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 FBXO38Q6PIJ6 1188 aa25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 CIR1Q86X95 450 aaPredicted RBP25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 CPXM2Q8N436 756 aa25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 HNRNPLLQ8WVV9 542 aaKnown RBP25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 ING5Q8WYH8 240 aa25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 P2RY11Q96G91 374 aa25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 WHRNQ9P202 907 aa25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 NUP210Q8TEM1 1887 aaPredicted RBP25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 NYNRINQ9P2P1 1898 aaKnown RBP25.27■■□□□ 1.64
GTF2A1-201ENST00000298173 C5orf60A6NFR6 353 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 GCATO75600 419 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 PRAMEF12O95522 483 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 ITIH2P19823 946 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 ADCY8P40145 1251 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 P3H1Q32P28 736 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 HEATR6Q6AI08 1181 aaKnown RBP25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 LRRC49Q8IUZ0 686 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 ARID3BQ8IVW6 561 aaPredicted RBP25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 BBS7Q8IWZ6 715 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 CCNYQ8ND76 341 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 ZDHHC18Q9NUE0 388 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 NFU1Q9UMS0 254 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 SHROOM3Q8TF72 1996 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 TRIOBPQ9H2D6 2365 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 REV3LO60673 3130 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 SCAMP3O14828 347 aaKnown RBP25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 SEC31AO94979 1220 aaKnown RBP25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 AP1B1Q10567 949 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 ADGRE1Q14246 886 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 ZDHHC24Q6UX98 284 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 CHST9Q7L1S5 443 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 ZSCAN18Q8TBC5 510 aaPredicted RBP25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 ART4Q93070 314 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 SNF8Q96H20 258 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 S1PR5Q9H228 398 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 NEUROG2Q9H2A3 272 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 ADAM7Q9H2U9 754 aa25.26■■□□□ 1.63
GTF2A1-201ENST00000298173 TSPAN3O60637 253 aa25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 CLDN11O75508 207 aa25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 ZNF189O75820 626 aaPredicted RBP25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 FSHRP23945 695 aa25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 CCNCP24863 283 aa25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 OR1E1P30953 314 aa25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 CHKAP35790 457 aa25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 VPS41P49754 854 aa25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 ZNF77Q15935 545 aa25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 TTC39BQ5VTQ0 682 aaPredicted RBP25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 APOL5Q9BWW9 433 aa25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 CDH22Q9UJ99 828 aa25.25■■□□□ 1.63
GTF2A1-201ENST00000298173 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 A0A1B0GVM2 712 aa25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 TCAF2A6NFQ2 919 aa25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 MAFKO60675 156 aa25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 PAPOLAP51003 745 aaKnown RBP25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 YBEYP58557 167 aaPredicted RBP25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 WASHC5Q12768 1159 aa25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 GPS1Q13098 491 aa25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 COL19A1Q14993 1142 aa25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 ARHGAP36Q6ZRI8 547 aa25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 NPAS3Q8IXF0 933 aa25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 AENQ8WTP8 325 aaKnown RBP25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 TMA16Q96EY4 203 aaKnown RBP25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 TBC1D30Q9Y2I9 924 aa25.24■■□□□ 1.63
GTF2A1-201ENST00000298173 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 DFFAO00273 331 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 CLCN6P51797 869 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 USP4Q13107 963 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 FAM182AQ5T1J6 154 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 GSPT2Q8IYD1 628 aaKnown RBP25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 CCDC13Q8IYE1 715 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 DEPDC1BQ8WUY9 529 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 FAM129AQ9BZQ8 928 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 ARGLU1Q9NWB6 273 aaPredicted RBP25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 PAK5Q9P286 719 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 RASA4BC9J798 803 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 DNALI1O14645 258 aaPredicted RBP25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 MTSS1O43312 755 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 RASA4O43374 803 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 DLX2Q07687 328 aaPredicted RBP25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 RHBDF2Q6PJF5 856 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 BBOF1Q8ND07 529 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 FBXO25Q8TCJ0 367 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 FGF13Q92913 245 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 LRRC45Q96CN5 670 aa25.23■■□□□ 1.63
GTF2A1-201ENST00000298173 MYO18AQ92614 2054 aaKnown RBP25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 RAMP2O60895 175 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 TBX10O75333 385 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 ERLIN1O75477 346 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 LTBRP36941 435 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 PLTPP55058 493 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 HLTFQ14527 1009 aaKnown RBP eCLIP25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 POLD3Q15054 466 aaPredicted RBP25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 PARP15Q460N3 678 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 BEND6Q5SZJ8 279 aaPredicted RBP25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 MPP7Q5T2T1 576 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 RNF43Q68DV7 783 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 C4orf22Q6V702 233 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms