RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 SCAMP5Q8TAC9 235 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 GFM2Q969S9 779 aaKnown RBP6.83□□□□□ -1.32
TMC1-201ENST00000297784 PEBP4Q96S96 227 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 DDX50Q9BQ39 737 aaKnown RBP6.83□□□□□ -1.32
TMC1-201ENST00000297784 COLEC11Q9BWP8 271 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 TRABDQ9H4I3 376 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 TBCCD1Q9NVR7 557 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 TAS2R1Q9NYW7 299 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 IP6K2Q9UHH9 426 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 NUMBLQ9Y6R0 609 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 WASF2Q9Y6W5 498 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 SF3B1O75533 1304 aaKnown RBP eCLIP6.83□□□□□ -1.32
TMC1-201ENST00000297784 YJEFN3A6XGL0 299 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 BUD23O43709 281 aaKnown RBP6.83□□□□□ -1.32
TMC1-201ENST00000297784 RNASEH1O60930 286 aaKnown RBP6.83□□□□□ -1.32
TMC1-201ENST00000297784 GJB5O95377 273 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 TGDSO95455 350 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 GCAP28676 217 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 KCNJ1P48048 391 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 GPR15P49685 360 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 ZNF143P52747 638 aaPredicted RBP6.83□□□□□ -1.32
TMC1-201ENST00000297784 ATXN1P54253 815 aaKnown RBP6.83□□□□□ -1.32
TMC1-201ENST00000297784 AP2B1P63010 937 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 PITX1P78337 314 aaPredicted RBP6.83□□□□□ -1.32
TMC1-201ENST00000297784 FPGSQ05932 587 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 AAGABQ6PD74 315 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 DCUN1D2Q6PH85 259 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 RINLQ6ZS11 566 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 ARCQ7LC44 396 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 SPRED2Q7Z698 418 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 ZNF554Q86TJ5 538 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 DTX3LQ8TDB6 740 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 RXFP2Q8WXD0 754 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 CENPIQ92674 756 aaPredicted RBP6.83□□□□□ -1.32
TMC1-201ENST00000297784 NT5C3BQ969T7 300 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 SMARCD1Q96GM5 515 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 PGLYRP2Q96PD5 576 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 MAGEB5Q9BZ81 275 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 OSBPL8Q9BZF1 889 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 PCDH18Q9HCL0 1135 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 MTO1Q9Y2Z2 717 aaKnown RBP6.83□□□□□ -1.32
TMC1-201ENST00000297784 NEU2Q9Y3R4 380 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 USP3Q9Y6I4 520 aa6.83□□□□□ -1.32
TMC1-201ENST00000297784 ATG2AQ2TAZ0 1938 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 LCHNA4D1U4 455 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 SPOPO43791 374 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 FKBP6O75344 327 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 FGBP02675 491 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 ATF2P15336 505 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 CCNFP41002 786 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 TKTL1P51854 596 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 MRPS5P82675 430 aaKnown RBP6.82□□□□□ -1.32
TMC1-201ENST00000297784 CDK16Q00536 496 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 TAP1Q03518 808 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 THOC5Q13769 683 aaKnown RBP6.82□□□□□ -1.32
TMC1-201ENST00000297784 PIGHQ14442 188 aaPredicted RBP6.82□□□□□ -1.32
TMC1-201ENST00000297784 LLGL1Q15334 1064 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 TMED2Q15363 201 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 ADRM1Q16186 407 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 KCNT1Q5JUK3 1230 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 SYPL2Q5VXT5 272 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 PM20D1Q6GTS8 502 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 RNF19BQ6ZMZ0 732 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 SLC26A9Q7LBE3 791 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 PDSS2Q86YH6 399 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 ZDHHC17Q8IUH5 632 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 THEM5Q8N1Q8 247 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 SLC39A11Q8N1S5 342 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 PDCD7Q8N8D1 485 aaKnown RBP6.82□□□□□ -1.32
TMC1-201ENST00000297784 ATAD1Q8NBU5 361 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 ACSF2Q96CM8 615 aaPredicted RBP6.82□□□□□ -1.32
TMC1-201ENST00000297784 MPP4Q96JB8 637 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 MED10Q9BTT4 135 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 TTPALQ9BTX7 342 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 PLVAPQ9BX97 442 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 PHACTR1Q9C0D0 580 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 NDE1Q9NXR1 346 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 ASIC3Q9UHC3 531 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 TBK1Q9UHD2 729 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 ANAPC5Q9UJX4 755 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 USTQ9Y2C2 406 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 VCANP13611 3396 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 USP34Q70CQ2 3546 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 BIRC5O15392 142 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 SOAT2O75908 522 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 USP17L7P0C7H9 530 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 PDGFRAP16234 1089 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 RPL17P18621 184 aaKnown RBP6.82□□□□□ -1.32
TMC1-201ENST00000297784 CETN2P41208 172 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 GRIA2P42262 883 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 SERPINB8P50452 374 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 HDAC4P56524 1084 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 ACTR3P61158 418 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 SLC1A5Q15758 541 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 CTXN3Q4LDR2 81 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 COL13A1Q5TAT6 717 aaPredicted RBP6.82□□□□□ -1.32
TMC1-201ENST00000297784 B3GNT6Q6ZMB0 384 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 CMTR2Q8IYT2 770 aaKnown RBP6.82□□□□□ -1.32
TMC1-201ENST00000297784 ZNF276Q8N554 614 aa6.82□□□□□ -1.32
TMC1-201ENST00000297784 COLGALT1Q8NBJ5 622 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms