RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 VAPBO95292 243 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 UQCRBP14927 111 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 GP5P40197 560 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 NIPA2Q8N8Q9 360 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 NLGN2Q8NFZ4 835 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 OR6P1Q8NGX9 317 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 FAM81AQ8TBF8 368 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 MCRS1Q96EZ8 462 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 CCT7Q99832 543 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 CCDC106Q9BWC9 280 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 NMRAL1Q9HBL8 299 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 SSU72Q9NP77 194 aaKnown RBP13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 PRMT7Q9NVM4 692 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 DDIT4Q9NX09 232 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 SIRPGQ9P1W8 387 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 CDY2AQ9Y6F7 541 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 CDY1Q9Y6F8 540 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 TRDMT1O14717 391 aaKnown RBP13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 AKAP10O43572 662 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 SPATA31D3P0C874 917 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 DHRS4L1P0CG22 281 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 ITGAXP20702 1163 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 GABRB2P47870 512 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 CDK7P50613 346 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 THOP1P52888 689 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 PDAP1Q13442 181 aaKnown RBP13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 CYLC2Q14093 348 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 RPS6KA2Q15349 733 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 GSTA3Q16772 222 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 SEL1L3Q68CR1 1132 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 SPATA31D4Q6ZUB0 917 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 NUP93Q8N1F7 819 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 HDAC11Q96DB2 347 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 ELMO2Q96JJ3 720 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 LHX5Q9H2C1 402 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 AP4B1Q9Y6B7 739 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 TCRBV5S1A1TA0A578 114 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 HMX2A2RU54 273 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 DNAJA2O60884 412 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 FGF3P11487 239 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 IL4RP24394 825 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 GRIA4P48058 902 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 CLDN10P78369 228 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 CSHL1Q14406 222 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 SLC41A1Q8IVJ1 513 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 KYQ8NBH2 561 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 ACVR1CQ8NER5 493 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 REPS2Q8NFH8 660 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 DCUN1D1Q96GG9 259 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 ZNF778Q96MU6 729 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 GATA5Q9BWX5 397 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 SMARCAD1Q9H4L7 1026 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 PCDHGB4Q9UN71 923 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 PCDHGB5Q9Y5G0 923 aa13.6□□□□□ -0.23
TNFRSF21-201ENST00000296861 A0A0A0MRY4 1105 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 RNF103-CHMP3A0A140T963 221 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 TRIM13O60858 407 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 IL18RAPO95256 599 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 HNRNPCP07910 306 aaKnown RBP eCLIP13.59□□□□□ -0.231e-7■■■■□ 20.8
TNFRSF21-201ENST00000296861 CHN2P52757 468 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 USP46P62068 366 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 CCNIQ14094 377 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 PCLAFQ15004 111 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 FSTL4Q6MZW2 842 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 GK5Q6ZS86 529 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 MYO1HQ8N1T3 1032 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 HASPINQ8TF76 798 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 RNF139Q8WU17 664 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 SPATA13Q96N96 652 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 SLC39A3Q9BRY0 314 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 DHRS4Q9BTZ2 278 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 HEMK1Q9Y5R4 338 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 FOXD2O60548 495 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 HUS1O60921 280 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 MT-ND1P03886 318 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 RPL10P27635 214 aaKnown RBP13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 PIK3R1P27986 724 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 FOXD4Q12950 439 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 ARL13AQ5H913 290 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 KYAT3Q6YP21 454 aaKnown RBP13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 ILDR2Q71H61 639 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 TMC7Q7Z402 723 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 MYLK4Q86YV6 388 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 FNIP1Q8TF40 1166 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 ZFAND2BQ8WV99 257 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 NFASCO94856 1347 aa13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 COL11A2P13942 1736 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF21-201ENST00000296861 B4GALT4O60513 344 aa13.58□□□□□ -0.23
TNFRSF21-201ENST00000296861 TSPAN3O60637 253 aa13.58□□□□□ -0.23
TNFRSF21-201ENST00000296861 GALK1P51570 392 aa13.58□□□□□ -0.23
TNFRSF21-201ENST00000296861 SNX16P57768 344 aa13.58□□□□□ -0.23
TNFRSF21-201ENST00000296861 PLOD1Q02809 727 aaPredicted RBP13.58□□□□□ -0.23
TNFRSF21-201ENST00000296861 PTK2BQ14289 1009 aa13.58□□□□□ -0.23
TNFRSF21-201ENST00000296861 AGKQ53H12 422 aa13.58□□□□□ -0.23
TNFRSF21-201ENST00000296861 MBLAC2Q68D91 279 aa13.58□□□□□ -0.23
TNFRSF21-201ENST00000296861 NAPRTQ6XQN6 538 aa13.58□□□□□ -0.23
TNFRSF21-201ENST00000296861 PIGZQ86VD9 579 aa13.58□□□□□ -0.23
TNFRSF21-201ENST00000296861 KCNMB4Q86W47 210 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms