RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TLR8Q9NR97 1041 aaKnown RBP13.7□□□□□ -0.22
HPS3-201ENST00000296051 ST3GAL5Q9UNP4 418 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 RIPK3Q9Y572 518 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 AGRPO00253 132 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 AOC2O75106 756 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 TNFAIP8O95379 198 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 FOLH1Q04609 750 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 STX5Q13190 355 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 MPP3Q13368 585 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 HSDL1Q3SXM5 330 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 CCDC92Q53HC0 331 aaPredicted RBP13.7□□□□□ -0.22
HPS3-201ENST00000296051 GFM2Q969S9 779 aaKnown RBP13.7□□□□□ -0.22
HPS3-201ENST00000296051 CEP19Q96LK0 163 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 SEPHS2Q99611 448 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 FRMD8Q9BZ67 464 aaPredicted RBP13.7□□□□□ -0.22
HPS3-201ENST00000296051 TBC1D3BA6NDS4 549 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 YWHAQP27348 245 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 EPHA3P29320 983 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 OXCT1P55809 520 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 GTF2BQ00403 316 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 LIN52Q52LA3 116 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 NET1Q7Z628 596 aaPredicted RBP13.7□□□□□ -0.22
HPS3-201ENST00000296051 TFAP2DQ7Z6R9 452 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 AMIGO2Q86SJ2 522 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 ASB7Q9H672 318 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 JCHAINP01591 159 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 ASGR1P07306 291 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 ME2P23368 584 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 RHOAP61586 193 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 MRPS6P82932 125 aaKnown RBP13.69□□□□□ -0.22
HPS3-201ENST00000296051 SFSWAPQ12872 951 aaKnown RBP13.69□□□□□ -0.22
HPS3-201ENST00000296051 NIPA1Q7RTP0 329 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 SLC9A9Q8IVB4 645 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 OSGEPL1Q9H4B0 414 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 ITM2BQ9Y287 266 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 M0R3G1 203 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 TRIM13O60858 407 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 PTPN7P35236 360 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 CSHL1Q14406 222 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 RALGPS1Q5JS13 557 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 CMC1Q7Z7K0 106 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 ANKRD23Q86SG2 305 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 SETD3Q86TU7 594 aaPredicted RBP13.69□□□□□ -0.22
HPS3-201ENST00000296051 ADAM32Q8TC27 787 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 WDR60Q8WVS4 1066 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 E5RJQ4 531 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 PIGNO95427 931 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 AXLP30530 894 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 TRPC1P48995 793 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 FOXR2Q6PJQ5 311 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 LBX2Q6XYB7 198 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 B3GNT6Q6ZMB0 384 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 TPGS1Q6ZTW0 290 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 TUBGCP3Q96CW5 907 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 CORO1BQ9BR76 489 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 TSPAN16Q9UKR8 245 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 UMODL1Q5DID0 1318 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 ABCC6O95255 1503 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 WFS1O76024 890 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 IFNA8P32881 189 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 NEK3P51956 506 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 PRKCZQ05513 592 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 MGAT5Q09328 741 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 RMND5BQ96G75 393 aaPredicted RBP13.69□□□□□ -0.22
HPS3-201ENST00000296051 WDR55Q9H6Y2 383 aaPredicted RBP13.69□□□□□ -0.22
HPS3-201ENST00000296051 PCDHGB4Q9UN71 923 aa13.69□□□□□ -0.22
HPS3-201ENST00000296051 NR5A2O00482 541 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 ALBP02768 609 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 TNFSF9P41273 254 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 SCNN1BP51168 640 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 DCTN2Q13561 401 aaKnown RBP13.68□□□□□ -0.22
HPS3-201ENST00000296051 ZC3H12AQ5D1E8 599 aaKnown RBP13.68□□□□□ -0.22
HPS3-201ENST00000296051 ZNF697Q5TEC3 545 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 FAM43BQ6ZT52 329 aaPredicted RBP13.68□□□□□ -0.22
HPS3-201ENST00000296051 SLC2A14Q8TDB8 520 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 LENG1Q96BZ8 264 aaPredicted RBP13.68□□□□□ -0.22
HPS3-201ENST00000296051 ZNF518BQ9C0D4 1074 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 EML4Q9HC35 981 aaKnown RBP13.68□□□□□ -0.22
HPS3-201ENST00000296051 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 SNCAIPQ9Y6H5 919 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 CA12O43570 354 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 MYO1DO94832 1006 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 LSM8O95777 96 aaKnown RBP13.68□□□□□ -0.22
HPS3-201ENST00000296051 CD48P09326 243 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 PEX2P28328 305 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 POU6F1Q14863 301 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 LRRC8BQ6P9F7 803 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 ZPBP2Q6X784 338 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 ADCK1Q86TW2 530 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 OOSP2Q86WS3 158 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 ZNF398Q8TD17 642 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 CPT1BQ92523 772 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 CASZ1Q86V15 1759 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 MAN1A2O60476 641 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 EPB42P16452 691 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 GAD2Q05329 585 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 KCNA10Q16322 511 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 DUSP28Q4G0W2 176 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 NOMO2Q5JPE7 1267 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 SPATA6LQ8N4H0 392 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms