RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 DHX40Q8IX18 779 aaKnown RBP9.64□□□□□ -0.87
CNOT9-202ENST00000295701 AHI1Q8N157 1196 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 SIX6OS1Q8N1H7 587 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 CFAP52Q8N1V2 620 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 TTC39CQ8N584 583 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 GANCQ8TET4 914 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 SLC35F5Q8WV83 523 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 IGSF8Q969P0 613 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 FAXDC2Q96IV6 333 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 MRGPRX3Q96LB0 322 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 PRICKLE1Q96MT3 831 aaPredicted RBP9.64□□□□□ -0.87
CNOT9-202ENST00000295701 SLC6A18Q96N87 628 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 PCED1AQ9H1Q7 454 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 NEUROG2Q9H2A3 272 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 SGK2Q9HBY8 427 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 ABCC13Q9NSE7 274 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 FBXL12Q9NXK8 326 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 HESX1Q9UBX0 185 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 SUN2Q9UH99 717 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 COQ4Q9Y3A0 265 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 A0A1W2PP55 124 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 TRIM49BA6NDI0 452 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 TTC34A8MYJ7 566 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 PLK4O00444 970 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 TNFSF14O43557 240 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 LATS1O95835 1130 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 FYNP06241 537 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 ATP5BP06576 529 aaKnown RBP9.63□□□□□ -0.87
CNOT9-202ENST00000295701 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
CNOT9-202ENST00000295701 CSKP41240 450 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 GRK6P43250 576 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 GRIA4P48058 902 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 CCT8P50990 548 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 TBX4P57082 545 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 RAB15P59190 212 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 KRT85P78386 507 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 KCNJ12Q14500 433 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 E2F5Q15329 346 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 C9orf64Q5T6V5 341 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 KIAA0895LQ68EN5 471 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 NCEH1Q6PIU2 408 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 TMEM270Q6UE05 265 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 LCLAT1Q6UWP7 414 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 ADAT2Q7Z6V5 191 aaKnown RBP9.63□□□□□ -0.87
CNOT9-202ENST00000295701 CARNMT1Q8N4J0 409 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 ZSCAN1Q8NBB4 408 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 KCTD13Q8WZ19 329 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 TTC17Q96AE7 1141 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 FCRL2Q96LA5 508 aaPredicted RBP9.63□□□□□ -0.87
CNOT9-202ENST00000295701 FAM129BQ96TA1 746 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 MIS12Q9H081 205 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 NUCKS1Q9H1E3 243 aaKnown RBP9.63□□□□□ -0.87
CNOT9-202ENST00000295701 RSPH9Q9H1X1 276 aaPredicted RBP9.63□□□□□ -0.87
CNOT9-202ENST00000295701 PABPC3Q9H361 631 aaKnown RBP9.63□□□□□ -0.87
CNOT9-202ENST00000295701 OSGEPQ9NPF4 335 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 CNGB3Q9NQW8 809 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 XPO7Q9UIA9 1087 aaKnown RBP9.63□□□□□ -0.87
CNOT9-202ENST00000295701 SLCO3A1Q9UIG8 710 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 PCDHB4Q9Y5E5 795 aa9.63□□□□□ -0.87
CNOT9-202ENST00000295701 A0A1B0GTQ1 180 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 A0A1W2PPC4 97 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 FIGNL2A6NMB9 653 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 PCDHGA12O60330 932 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 STX10O60499 249 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 LTFP02788 710 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 SETSIPP0DME0 302 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 ZBTB16Q05516 673 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 BNIP3Q12983 259 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 DNAJC3Q13217 504 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 SMAD1Q15797 465 aaKnown RBP9.62□□□□□ -0.87
CNOT9-202ENST00000295701 CST6Q15828 149 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 TTC31Q49AM3 519 aaPredicted RBP9.62□□□□□ -0.87
CNOT9-202ENST00000295701 DCAF6Q58WW2 860 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 ISM2Q6H9L7 571 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 MMAAQ8IVH4 418 aaKnown RBP9.62□□□□□ -0.87
CNOT9-202ENST00000295701 MFN1Q8IWA4 741 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 APCDD1Q8J025 514 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 GALNT15Q8N3T1 639 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 FIBINQ8TAL6 211 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 SLC35C1Q96A29 364 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 RPL10LQ96L21 214 aaKnown RBP9.62□□□□□ -0.87
CNOT9-202ENST00000295701 CAAP1Q9H8G2 361 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 DKK4Q9UBT3 224 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 ERVW-1Q9UQF0 538 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 NAALADL1Q9UQQ1 740 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 NCKAP1Q9Y2A7 1128 aa9.62□□□□□ -0.87
CNOT9-202ENST00000295701 A0A1W2PQ27 194 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 A0A1W2PQ64 194 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 A0A1W2PR77 199 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 FAM181BA6NEQ2 426 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 M0QYV0 167 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 ENC1O14682 589 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 VILLO15195 856 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 RNASEH2AO75792 299 aaKnown RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 MOCS2O96007 188 aaPredicted RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 PRB1P04280 392 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 VAV1P15498 845 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
CNOT9-202ENST00000295701 ITPKBP27987 946 aa9.61□□□□□ -0.87
CNOT9-202ENST00000295701 SLC8A1P32418 973 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms