RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 GPSM1Q86YR5 675 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 MKL1Q969V6 931 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 VPS33AQ96AX1 596 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 SEPHS2Q99611 448 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 HGH1Q9BTY7 390 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 AGXT2Q9BYV1 514 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 MIR1-1HGQ9H1L0 117 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 CDH9Q9ULB4 789 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 ZNF839A8K0R7 811 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 SNRPD1P62314 119 aaKnown RBP17.59■□□□□ 0.41
SHANK1-201ENST00000293441 CREMQ03060 361 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 GRIK3Q13003 919 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 CRY1Q16526 586 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 SHROOM1Q2M3G4 852 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-201ENST00000293441 CHADLQ6NUI6 762 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 MTMR9Q96QG7 549 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 AKAP7Q9P0M2 348 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-201ENST00000293441 CCDC85CA6NKD9 419 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 CLTBP09497 229 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 FEN1P39748 380 aaKnown RBP17.59■□□□□ 0.41
SHANK1-201ENST00000293441 GPR15P49685 360 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 SDHAF4Q5VUM1 108 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 LUZP2Q86TE4 346 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 CERS5Q8N5B7 392 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 OSCP1Q8WVF1 389 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 NACC2Q96BF6 587 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 ACO2Q99798 780 aaKnown RBP17.59■□□□□ 0.41
SHANK1-201ENST00000293441 FTHL17Q9BXU8 183 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 TCF7L2Q9NQB0 619 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 SOHLH2Q9NX45 425 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 SYBUQ9NX95 663 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 ARL15Q9NXU5 204 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 TNFSF13BQ9Y275 285 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 TLL1O43897 1013 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 NQO1P15559 274 aaKnown RBP17.59■□□□□ 0.41
SHANK1-201ENST00000293441 ATP6V1C1P21283 382 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 PSMB4P28070 264 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 TREML2Q5T2D2 321 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 ZMAT2Q96NC0 199 aaKnown RBP17.59■□□□□ 0.41
SHANK1-201ENST00000293441 DEPDC7Q96QD5 511 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 C2orf49Q9BVC5 232 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-201ENST00000293441 TBC1D23Q9NUY8 699 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 GPSM3Q9Y4H4 160 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 KDELR1P24390 212 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 RHBDL3P58872 404 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 PPP3CAQ08209 521 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 APBB2Q92870 758 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 SAE1Q9UBE0 346 aaPredicted RBP17.58■□□□□ 0.41
SHANK1-201ENST00000293441 MAFO75444 373 aaPredicted RBP17.58■□□□□ 0.41
SHANK1-201ENST00000293441 PSMC3P17980 439 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 PFKPQ01813 784 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 NOL9Q5SY16 702 aaKnown RBP17.58■□□□□ 0.41
SHANK1-201ENST00000293441 OLFML2BQ68BL8 750 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 TCP10LQ8TDR4 215 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 BPIFA1Q9NP55 256 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 LRRC4BQ9NT99 713 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 SYNPO2Q9UMS6 1093 aa17.58■□□□□ 0.41
SHANK1-201ENST00000293441 FGF10O15520 208 aaPredicted RBP17.58■□□□□ 0.4
SHANK1-201ENST00000293441 NCF4Q15080 339 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 FAM228AQ86W67 206 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 MYCBPAPQ8TBZ2 947 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 PRKAG3Q9UGI9 489 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 SLURP2P0DP57 97 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 USP41Q3LFD5 358 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 MAGEC3Q8TD91 643 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 TM6SF2Q9BZW4 377 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 ZNHIT2Q9UHR6 403 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 FAM220BPB1ANY3 271 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 ADRB2P07550 413 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 HSMCR30P0CW71 290 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 DPYSL3Q14195 570 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 FASTKQ14296 549 aaKnown RBP17.58■□□□□ 0.4
SHANK1-201ENST00000293441 UTP15Q8TED0 518 aaKnown RBP17.58■□□□□ 0.4
SHANK1-201ENST00000293441 MRPL48Q96GC5 212 aaKnown RBP17.58■□□□□ 0.4
SHANK1-201ENST00000293441 AVENQ9NQS1 362 aaPredicted RBP17.58■□□□□ 0.4
SHANK1-201ENST00000293441 OPTCQ9UBM4 332 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 SPATA31D1Q6ZQQ2 1576 aa17.58■□□□□ 0.4
SHANK1-201ENST00000293441 A0A087X1B8 175 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 MEI4A8MW99 385 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 TRUB2O95900 331 aaKnown RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 AMD1P17707 334 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 PKN2Q16513 984 aaKnown RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 UNC93AQ86WB7 457 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 GPR152Q8TDT2 470 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 GLMNQ92990 594 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 KAT5Q92993 513 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 C18orf25Q96B23 403 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 ETNK2Q9NVF9 386 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 NFKBIL1Q9UBC1 381 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 BUD23O43709 281 aaKnown RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 CNPP09543 421 aaKnown RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 RAET1GQ6H3X3 334 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 CYP4Z2PQ8N1L4 340 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 VGLL2Q8N8G2 317 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 ELMO1Q92556 727 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 TMEM131LA2VDJ0 1609 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 CLDN5O00501 218 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 MEIS2O14770 477 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 SARSP49591 514 aaKnown RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 TBCELQ5QJ74 424 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms