RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 GRK3P35626 688 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ALDH9A1P49189 494 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 TUBA1BP68363 451 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 NR1D2Q14995 579 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF284Q2VY69 593 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 FAM153CQ494X1 144 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 CRY2Q49AN0 593 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 TTI2Q6NXR4 508 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ILDR2Q71H61 639 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 TUBA1AQ71U36 451 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 AMER2Q8N7J2 671 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 COLGALT1Q8NBJ5 622 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 SLC25A23Q9BV35 468 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 SLITRK2Q9H156 845 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 PLCH1Q4KWH8 1693 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 CCDC154A6NI56 674 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 CCNT2O60583 730 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 RGS20O76081 388 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 GH1P01241 217 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 FGFR3P22607 806 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ACADVLP49748 655 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 CHN2P52757 468 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 MYBPC2Q14324 1141 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ZCCHC23Q6ZST2 131 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 C8orf59Q8N0T1 100 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 HDAC7Q8WUI4 952 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 SPIRE2Q8WWL2 714 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 MTMR8Q96EF0 704 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 RUSC1Q9BVN2 902 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 PLGRKTQ9HBL7 147 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 MID1IP1Q9NPA3 183 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 KCNH7Q9NS40 1196 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 LNPEPQ9UIQ6 1025 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 SALL1Q9NSC2 1324 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 DOT1LQ8TEK3 1739 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ENTPD3O75355 529 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ACAP1Q15027 740 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 TLDC1Q6P9B6 456 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 CAMK1DQ8IU85 385 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 AGBL3Q8NEM8 1001 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ADPRHL2Q9NX46 363 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 CDH9Q9ULB4 789 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 UBQLN1Q9UMX0 589 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 GSTK1Q9Y2Q3 226 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 MRPS7Q9Y2R9 242 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 A0A096LPK6 155 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ADCY6O43306 1168 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ADRA1DP25100 572 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 IDH2P48735 452 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ARF5P84085 180 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 POU6F1Q14863 301 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ZCCHC8Q6NZY4 707 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 TMEM110Q86TL2 294 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 DNAAF5Q86Y56 855 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 FBXW8Q8N3Y1 598 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 FBXO39Q8N4B4 442 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 TMC2Q8TDI7 906 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 SLC20A1Q8WUM9 679 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 LPAR1Q92633 364 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 JMJD4Q9H9V9 463 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 TBCCD1Q9NVR7 557 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 DPP3Q9NY33 737 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 KIAA1257Q9ULG3 409 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 TAF6LQ9Y6J9 622 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 C15orf38-AP3S2A0A0A6YYH1 394 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 F5H5T6 163 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 OGTO15294 1046 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 VAV1P15498 845 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 DRD4P21917 467 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 PBLDP30039 288 aaPredicted RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 RCVRNP35243 200 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 PSMD4P55036 377 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 MAD2L1Q13257 205 aaPredicted RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 TDRD10Q5VZ19 366 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF662Q6ZS27 426 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 NCCRP1Q6ZVX7 275 aaPredicted RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ARPINQ7Z6K5 226 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 TSPAN14Q8NG11 270 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 METTL6Q8TCB7 284 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 SKA1Q96BD8 255 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF518BQ9C0D4 1074 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 MTMR12Q9C0I1 747 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ARHGAP28Q9P2N2 729 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 HBS1LQ9Y450 684 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 RPS12P25398 132 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 RPL21P46778 160 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ALDH1A3P47895 512 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 NPY2RP49146 381 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 PTSQ03393 145 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 GRB10Q13322 594 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 SKIV2LQ15477 1246 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ATAD3BQ5T9A4 648 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ANKS6Q68DC2 871 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 NOTUMQ6P988 496 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 PCDH20Q8N6Y1 951 aaKnown RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 POMGNT2Q8NAT1 580 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 MAGEE2Q8TD90 523 aaPredicted RBP10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ACTRT2Q8TDY3 377 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 RXFP2Q8WXD0 754 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms