RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 AVPR1AP37288 418 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 PUS10Q3MIT2 529 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 KCNT1Q5JUK3 1230 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 RFX6Q8HWS3 928 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 PQLC3Q8N755 202 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 SUSD6Q92537 303 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ANLNQ9NQW6 1124 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 DYRK4Q9NR20 520 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ARHGEF4Q9NR80 690 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 SAMD15Q9P1V8 674 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 EPS15L1Q9UBC2 864 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 FARP1Q9Y4F1 1045 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 F5H5T6 163 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ZNF185O15231 689 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 TACR2P21452 398 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 MCM3P25205 808 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 NDST2P52849 883 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 OXCT1P55809 520 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 LMNB2Q03252 620 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ADGRE1Q14246 886 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 RBBP5Q15291 538 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 FAM133BQ5BKY9 247 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ATAT1Q5SQI0 421 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ADGRF1Q5T601 910 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 TXNDC8Q6A555 127 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 NLRP14Q86W24 1093 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ARL14EPQ8N8R7 260 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ASIC4Q96FT7 647 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 SCYL1Q96KG9 808 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 FAM161BQ96MY7 647 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ZYG11BQ9C0D3 744 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 MARK1Q9P0L2 795 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 PCYOX1Q9UHG3 505 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 CD207Q9UJ71 328 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 CDH7Q9ULB5 785 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 DRG1Q9Y295 367 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 FAM186AA6NE01 2351 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 I6L893 689 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 CDH4P55283 916 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 SMAD4Q13485 552 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 DHX34Q14147 1143 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ATP13A4Q4VNC1 1196 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 C6orf163Q5TEZ5 329 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 NCBP2-AS2Q69YL0 99 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 NADSYN1Q6IA69 706 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 SDCCAG8Q86SQ7 713 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 MIB1Q86YT6 1006 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 PALM2Q8IXS6 379 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 RTL3Q8N8U3 475 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 MAB21L3Q8N8X9 362 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 HJURPQ8NCD3 748 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 TCEAL4Q96EI5 215 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 OLFM3Q96PB7 478 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 TDP1Q9NUW8 608 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 AGO1Q9UL18 857 aaKnown RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 SH3BP1Q9Y3L3 701 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ANGPTL3Q9Y5C1 460 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 CFAP69A5D8W1 941 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 CXCR5P32302 372 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 GTF2F1P35269 517 aaKnown RBP eCLIP8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 CHKAP35790 457 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 ZNF211Q13398 564 aaPredicted RBP8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 TMCO4Q5TGY1 634 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 NUDT18Q6ZVK8 323 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 PLD5Q8N7P1 536 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 PCDH19Q8TAB3 1148 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 NKD2Q969F2 451 aaPredicted RBP8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 RNF25Q96BH1 459 aaPredicted RBP8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 IPO11Q9UI26 975 aaKnown RBP8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 EFCAB8A8MWE9 144 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 KRIT1O00522 736 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 CKMP06732 381 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 CD48P09326 243 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 GOT1P17174 413 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 AUHQ13825 339 aaKnown RBP8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 NOMO1Q15155 1222 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 NPAS3Q8IXF0 933 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 SPATA4Q8NEY3 305 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 SMARCD2Q92925 531 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 USP13Q92995 863 aaPredicted RBP8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 GPATCH2LQ9NWQ4 482 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 FEZ2Q9UHY8 353 aaPredicted RBP8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 DOCK4Q8N1I0 1966 aa8.65□□□□□ -1.02
PTPDC1-201ENST00000288976 LRIG2O94898 1065 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 ITGAVP06756 1048 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 IRF1P10914 325 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 C4orf22Q6V702 233 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 MTSS1LQ765P7 747 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 CDKL3Q8IVW4 592 aaPredicted RBP8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 UMODL1-AS1Q8N2C9 162 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 CCHCR1Q8TD31 782 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 SNX19Q92543 992 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 ELSPBP1Q96BH3 223 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 HAUS1Q96CS2 278 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 SARS2Q9NP81 518 aaKnown RBP8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 KLHL11Q9NVR0 708 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 CFAP97Q9P2B7 532 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 FBXL21Q9UKT6 434 aa8.65□□□□□ -1.03
PTPDC1-201ENST00000288976 NRG2O14511 850 aaPredicted RBP8.64□□□□□ -1.03
PTPDC1-201ENST00000288976 CLDN11O75508 207 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms